Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91072g00002 ATGAAGGAAGGGAATGATGGATTTGTGAGAGCTGATCAGATTGATCTCAAGAGCATAGATGAGCAGCTTGAGAGGCACCTCAACAAGGTTCTCACCATTGACAAGAACAAGCAGAAGCAAGGTGGAGGAGCAGAAGAACAAGAACAGCAACAAGATGGTGTTGCTGTTCCTATTCATGCAAGTTCTGTTGCCACTGCCACCAAGTTCAAGAGTGTTGTCTCTTCCAATTTCAGGAAGCAGAGGCAGGAGTGGGAAATTGACCCTTCTAACCTCATCATCAAAGGTGTAATAGCCCGTGGAACTTTTGGTACTGTCCACCGTGGTATCTATGATGGCCAAGATGTTGCTGTTAAAATGCTGGACTATGGTGAAGAAGGGCAACGGACCGATGCTGAAATCGCCGCCCTGAGGTCGGCGTTTACACAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCAAATGTGACCAAGTTCATAGGAGCAACAATGGGATCTTCAGAATTGCAGATACAAACTGATGATGGTCTAATTAGCCTGCCAAACAATATTTGCTGTGTTGTTGTCGAGTATCTTGCTGGAGGTGCGCTCAAATCTTTCCTGATAAAGAACAGGAGAAGAAAGTTAGCTTTTAAGGTTGTCATCCAGTTGGCACTTGATATTGCAAGAGGGCTGAGTTATCTTCATTCTCAAAAGATTGTTCATAGAGATGTGAAGACAGAGAACATGTTGTTGGATAAGACACGGACTGTTAAAATTGCTGATTTCGGCGTTGCCCGTGTTGAAGCATCAAATCCTAATGACATGACTGGGGAGACCGGTACACTTGGTTACATGGCTCCTGAGGTCTTAAATGGCAACCCCTATAACAGGAAATGCGATGTGTACAGTTTTGGAATCTGTTTATGGGAAATATATTGCTGTGACATGCCATATCCCGACCTCAGTTTCTCAGAGATTACAGCAGCTGTCGTTCGCCAGAATCTGAGACCAGAAATACCAAGATGTTGTCCTAGCTCTCTGGCAAACGTAATGAAGAGATGCTGGGACGCCAATCCTGATAAACGGCCAGAGATGGACGAGGTAGTTTCCTTGCTGGAGGCCATCGACACATCGAAAGGTGGAGGTATGATCCCTCCTGATCAGCAGCAGGGATGTCTTTGCTTTCGCAAGAAACGAGGGCCTTGA 1185 0.454 MKEGNDGFVRADQIDLKSIDEQLERHLNKVLTIDKNKQKQGGGAEEQEQQQDGVAVPIHASSVATATKFKSVVSSNFRKQRQEWEIDPSNLIIKGVIARGTFGTVHRGIYDGQDVAVKMLDYGEEGQRTDAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDDGLISLPNNICCVVVEYLAGGALKSFLIKNRRRKLAFKVVIQLALDIARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITAAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSLLEAIDTSKGGGMIPPDQQQGCLCFRKKRGP 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91072g00002 394 Gene3D Phosphorylase Kinase; domain 1 79 173 - -
Stsc91072g00002 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Stsc91072g00002 394 Gene3D Transferase(Phosphotransferase) domain 1 192 382 - -
Stsc91072g00002 394 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91072g00002 394 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 66 368 - -
Stsc91072g00002 394 SUPERFAMILY Protein kinase-like (PK-like) 68 365 IPR011009 -
Stsc91072g00002 394 FunFam Serine/threonine-protein kinase HT1 191 376 - -
Stsc91072g00002 394 Pfam Protein tyrosine and serine/threonine kinase 94 365 IPR001245 GO:0004672|GO:0006468
Stsc91072g00002 394 MobiDBLite consensus disorder prediction 34 54 - -
Stsc91072g00002 394 FunFam Kinase suppressor of Ras 1 80 174 - -
Stsc91072g00002 394 CDD STKc_MAP3K-like 97 365 - -
Stsc91072g00002 394 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91072g00002 394 PRINTS Tyrosine kinase catalytic domain signature 336 358 IPR001245 GO:0004672|GO:0006468
Stsc91072g00002 394 PRINTS Tyrosine kinase catalytic domain signature 188 201 IPR001245 GO:0004672|GO:0006468
Stsc91072g00002 394 PRINTS Tyrosine kinase catalytic domain signature 292 314 IPR001245 GO:0004672|GO:0006468
Stsc91072g00002 394 PRINTS Tyrosine kinase catalytic domain signature 226 244 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91072g00002 Stsc-Chr91072 33848 37613 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91072g00002 1 326 MAP Kinase Kinase Kinase AT5G50000 77.607 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Stsc91072g00002 PK_Tyr_Ser-Thr 3.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91072g00002 - - gmx:100809898 691.419