Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91068g00007 ATGAACAAGGGGGACAATGCATGGCAGCTCATGGCCGCAACAATGGTGGGCCTCCAAACCATTCCGGGCCTAGTCATCTTGTACGGAAGCATGGTCAACAAGTCATGGGCCATCAACTCCGCCTTCATGGCCTTCTATGCTTTCGCCGCCGTCATCCTTTGCTGGGCCGCCTGGGCTTACCGCATGTCATTCGGCGAAGAGTGGGTGTTTTTCGTGGGAAAGCCCGCGGTTGCGTTGGACGAGAAGTTCCTTCTAGGGCAGGCCTTTCTGGGAGCGTTCCCTACGGCAACCATGGTGTTCTTCCAAGGAGTGTTTGCGGCCATTACTGTGGTCCTGATTGGTGGTTCATTGCTTGGAAGGATGAACATCCGTGCATGGATGTTGTTTGTTCCTCTCTGGCTTACTTTTTCATACACTGTCACCGCTTTCAGTATTTGGAGCCCTAATGGCTGGTTAGCTAAGCGTGGAGTTATTGACTTTGCCGGTGGCTTTGTTATTCACCTCTCTGCCGGAGTTGCAGCCACTACTGCAGCTTTCTGGGTGGGTCCAAGAGCAGAGAAGGAGAAAGAAACATTAGGTTCAAATAATATGATTGTAGCGTTGGGAGGTGCGGGCTTGGTTTGGATGGGGTGGTCGGGCTTCAATGGTGGAGGCCCGTTCGCCGTGAACACAGTTGCATCTCTGGCAATCCTAAACACTCATGTCTGCGCTGCAACTAGCATCATCACATGGCTCATTTTCGACACTTTCCATTCCGGCAAGCCCACCGTGTTTGGCGGCATTCAAGGCATGATCACCGGCCTTGTTTGCATTACACCCGCCGCAGGAATAGTGCAAGGGTGGGCAGCAATTTTGATGGGCTTTATCTCCGGAAGTGTACCGTGGTACACATTAATGGTGGTCCACCATAAGATCAAATTGCTAAACAAAATAGATGATCCAATGGCCATATTCCACACACATGCCATAACCGGAACTCTTGGAGGAATTCTGACAGGATTATTTGCTGTTCCTAAATTGTGTCGTCTCTTCTATGGAGTGCCTGATTGGGAGAAATACACTGGACTCTTGTATGGGCTTCAAAACGGTTCAACCCATGCTGGTTTGAAACAGTTGTGGATCCAATTAGAAGCCATTGCTTTCGTGGTTATATTCAATGTTATTATTACGAGCTTGATATGCTTGGGTGTGAGGGGCATAGTGCCACTAAGGGTTGTTGATGCATTGGAAGTGGGTGGTGACATTGGCATGCATGGAGAAGAGGCATTTGCCTTGTGTTGCTCCGAGGATAGGGATAATAGCAAGTTTGAGAATGTAAAGCGCAACAGAATTTATGACACTCAAGATTTTCAGTCCTCTGTGGACGAATCATCAAGGACGATGACTGTTAGTGAATCTCAAATGGTTTGA 1410 0.4879 MNKGDNAWQLMAATMVGLQTIPGLVILYGSMVNKSWAINSAFMAFYAFAAVILCWAAWAYRMSFGEEWVFFVGKPAVALDEKFLLGQAFLGAFPTATMVFFQGVFAAITVVLIGGSLLGRMNIRAWMLFVPLWLTFSYTVTAFSIWSPNGWLAKRGVIDFAGGFVIHLSAGVAATTAAFWVGPRAEKEKETLGSNNMIVALGGAGLVWMGWSGFNGGGPFAVNTVASLAILNTHVCAATSIITWLIFDTFHSGKPTVFGGIQGMITGLVCITPAAGIVQGWAAILMGFISGSVPWYTLMVVHHKIKLLNKIDDPMAIFHTHAITGTLGGILTGLFAVPKLCRLFYGVPDWEKYTGLLYGLQNGSTHAGLKQLWIQLEAIAFVVIFNVIITSLICLGVRGIVPLRVVDALEVGGDIGMHGEEAFALCCSEDRDNSKFENVKRNRIYDTQDFQSSVDESSRTMTVSESQMV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91068g00007 469 SUPERFAMILY Ammonium transporter 2 405 - -
Stsc91068g00007 469 Pfam Ammonium Transporter Family 7 423 IPR024041 GO:0008519|GO:0016020|GO:0072488
Stsc91068g00007 469 PANTHER AMMONIUM TRANSPORTER MEP2 1 434 IPR001905 GO:0008519|GO:0016020|GO:0072488
Stsc91068g00007 469 PRINTS Rhesus blood group protein signature 229 251 IPR002229 GO:0005886
Stsc91068g00007 469 PRINTS Rhesus blood group protein signature 102 118 IPR002229 GO:0005886
Stsc91068g00007 469 PRINTS Rhesus blood group protein signature 322 338 IPR002229 GO:0005886
Stsc91068g00007 469 PRINTS Rhesus blood group protein signature 198 216 IPR002229 GO:0005886
Stsc91068g00007 469 Gene3D Ammonium transporter AmtB like domains 1 443 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91068g00007 Stsc-Chr91068 30529 32411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91068g00007 96 463 Inorganic Solute Cotransporters AT2G38290 49.596 2.43e-116 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91068g00007 K03320 - gmx:100782944 702.59