Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91058g00002 ATGGCACTTTGTTGTGGAACCGGGTTTAACCCAATTCTAGAGAGTAATTCGGCTCGAAATTTGTCGACAAGGCTTATTGGATCTGTTCCCTTGCGTTTTACTGGACAGAGCTCTTATATGGTCAGGAGAAGAAGGCACAAGGGAATATGCTGCTCATCACTGAAGAAAGCTGCTTCTGCATCTTCTTCAGAGTCACAGGAAGAAAGTGCATTATCAGTTTGCTTGGAGGAGGAGGAGGAGCTGGATCATGTTATACGGTTCAAAATGTCAGACTTCAAGATGTTGGATCGTGTTAGCATCGGGCTCGGTGGGCGGGCAGATGAGGTGGTTTTTGAAGCCAAGGTGAAGGATAGTGGTAGCCCTCTGTATAACACAAGAGTTGTACTTAGACAGCTGTCCAGTGCCCAAGCTCAGCGTAGAGGCAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGCCGAAAACTTCTGTATCATTCTTATTCGATGCATGTTCATGGTTACATCTCTCTGCCTGCAAATGGTGGTAGTAATTCATTTATCCTAGTCCATGGGTATCATGGTAGTTTTTCCTTGAGGCACTGGCTCCAGCAGTCTGATTGGCTCCCAACTTTAGAAGCCACTCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTCGGAGAAGACACAACTGGAGGTCCTGCTGTTTCTAGGCAATTGAGGCTTATACGAATCTTGATGCGTGATCTTCTAATCGGGGTAAATTACCTGCATAGCCATGGTCTTGCGCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCCGTGGATAGACATATCAAAGTAGGTATACTGGGAAATGCTGCTGACTTTTATGAGGATGGTTCAAATAACGATTCTATGGACAACATGGACCGGCGGCAGATGATGATTGCATTTGACATGAGATGTGTGGGTTTCATAATGGCTAAAATGGTGATGAGGGAGCTTATGGATCCTTCGATCTTTGCAAAGTTCAAATTATTCCTCACAAAGGGATATGATCCTTCATGTCTGCGAGAACTTATGTTGGAAATCCTTGGCAGAAGTTCTCCAAATGGAAATGCTGGCTTACAAATACTTGATAGGAACTGGGGTGCAGGATGGCACCTTCTGTCTTTATTGCTTGCAAACAAGCCTTCACAAAGGATAAGTTGTTTGCATGCTCTAAGACACCCATTTCTGTGTGGTCCAAGATGGCGTGTAGCTCCGTCAATGGACATTATCCGATGGGGCCTAGGTTCCACTGCAATGCGTATCAGTGAGGAATACATTTATCGTCAGCCTCAGCGTAGTAGACTTGCCCACTTCATTGACTTAATGGAGATGTTGAATCCTCATCCAAAGCCAAAGAACTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTGTACTGCACTGGGAGGCATGTAGGACTGACTCTCCGCCAACCTCCGGCACGTGTACTCATCGGAGATGTGCATTTAACTGTGACAAGAGAATCAAAGATGAAGGCCAATCTTTCTTTCGTATCTGATGTTAGTTTCTCCGTCATGATCGGTCAGGACTGGCCCCACGACAAAGCTGGCAAAGCCGGGAGATTACAGGCGAATTCTTCATTTATGCTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACCAAACAACAGAGAAGAAGTTCTTCTTTGGCCCTTTCGGTAGTGAGGAGGCTTTAGCTCAAAAATTCACCGGCAAGAAATGGCGAAAAATAACACCATTCAAGGAGTTTCCATCAAGTCTTCCTGCAGCAAAGCTTACTTCAAGTGACATTGATGTGACTATGAATCTTGACGATCCATTAAATAGAGATATTGATATGGCACGGAATGTACTTCAAGAACTAAGAACCCAAATCCCACCAGAAATATTTGATTTGTCAAAGGTTGTCTGTGGAACTTATGTGGATTCCAGGATGCTTGTCCTTCGTGGGGTTAATGGATCAGCACTCCTATTTACAAGGTCTTTTGTAGATAAGAATAAATCTAGTTAG 2031 0.4461 MALCCGTGFNPILESNSARNLSTRLIGSVPLRFTGQSSYMVRRRRHKGICCSSLKKAASASSSESQEESALSVCLEEEEELDHVIRFKMSDFKMLDRVSIGLGGRADEVVFEAKVKDSGSPLYNTRVVLRQLSSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMHVHGYISLPANGGSNSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYEDGSNNDSMDNMDRRQMMIAFDMRCVGFIMAKMVMRELMDPSIFAKFKLFLTKGYDPSCLRELMLEILGRSSPNGNAGLQILDRNWGAGWHLLSLLLANKPSQRISCLHALRHPFLCGPRWRVAPSMDIIRWGLGSTAMRISEEYIYRQPQRSRLAHFIDLMEMLNPHPKPKNWLELLPGKWRLLYCTGRHVGLTLRQPPARVLIGDVHLTVTRESKMKANLSFVSDVSFSVMIGQDWPHDKAGKAGRLQANSSFMLRAGRRLYLKQDQTTEKKFFFGPFGSEEALAQKFTGKKWRKITPFKEFPSSLPAAKLTSSDIDVTMNLDDPLNRDIDMARNVLQELRTQIPPEIFDLSKVVCGTYVDSRMLVLRGVNGSALLFTRSFVDKNKSS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91058g00002 676 SUPERFAMILY Protein kinase-like (PK-like) 87 413 IPR011009 -
Stsc91058g00002 676 Gene3D Transferase(Phosphotransferase) domain 1 228 404 - -
Stsc91058g00002 676 SMART serkin_6 92 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91058g00002 676 ProSiteProfiles Protein kinase domain profile. 92 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91058g00002 676 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 400 650 - -
Stsc91058g00002 676 Pfam PAP_fibrillin 437 513 IPR006843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91058g00002 Stsc-Chr91058 29738 34506 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Stsc91058g00002 PAP_fibrillin 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91058g00002 - - gmx:100810786 1112.06