Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91055g00002 ATGGAGTTGTTTCCAGCACAACCAGACTTATCGTTGCAAATCAGCCCTCCAAACGCCACTACCACCGCCAACTCGAAACAGCAACAAGAAGAAGTTGATTTGGGTTTCTGGAAGAGAGCCTTGGACTCTTCTAGAACCTCCTTCTCCTCCAACTCTTCTTCTTCTACTACTTTCTCCAAACCCTGCTTCGACCTCTCCCTCTCCAACCCAACCACAACAACAACAAGGCCTAATCATAACAATAACATTCTTTCTTCTTCTTCATCACACTACTACTTCTCCTCTAATCATAATCATAATACCAATAATAACCTCATTCACCACCATAACAACAACAACAACAACAATCCTTTGTTTCAATCGTTTCACCATTACTACCACCAGCCACTGTTACAGCCACAGCTTCAGCCGCAGCCTCAGCCGCAGAGCCTAAGCCAGGAGCTTGGTTTTCTCAGACCAATCAGAGGGATCCCGGTCTACCAAAACCCACCTTCTTTGCCATTTCCACACCACCACCACCACCATCTTCTAGAACCTTCCTCTCCTCCCACCACCGCCAACACGGGCTCCGCCGTGTCAACTCACTTTCAGTCTCAGGCTTTGATGCGATCGAGATTCTTGTCGAGATTCCCCGCCAAACGGAGCATGAGAGCCCCAAGGATGCGCTGGACTACCACACTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGCGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAACTAATGGATGTGAAGGATCTCACTCTAGCACATGTTAAGTCACATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCTGCTTCTTCAGGGCAATCTGATGTATATGATAATAGATCATCAGGAGATACATCTGAAGACATAATGTTTGACATAAACTCACCATCAACAAGGAGATCTGATNNNNNNNNNNTGTTAATAATCAAGATAAAGAATATCGTGGCCTTTGGAGTAACTCTTCCAGGGAAGGTTGGTTGCATGGGAAGCCAAAGCAGGTTGATTCTGTTGGGAACAACGTGA 1059 0.457 MELFPAQPDLSLQISPPNATTTANSKQQQEEVDLGFWKRALDSSRTSFSSNSSSSTTFSKPCFDLSLSNPTTTTTRPNHNNNILSSSSSHYYFSSNHNHNTNNNLIHHHNNNNNNNPLFQSFHHYYHQPLLQPQLQPQPQPQSLSQELGFLRPIRGIPVYQNPPSLPFPHHHHHHLLEPSSPPTTANTGSAVSTHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNRSSGDTSEDIMFDINSPSTRRSDXXXXLIIKIKNIVAFGVTLPGKVGCMGSQSRLILLGTT 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91055g00002 352 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 310 IPR044847 GO:0000976|GO:0006355|GO:0010158
Stsc91055g00002 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 219 272 IPR006447 GO:0003677
Stsc91055g00002 352 MobiDBLite consensus disorder prediction 69 120 - -
Stsc91055g00002 352 Pfam Myb-like DNA-binding domain 220 271 IPR001005 -
Stsc91055g00002 352 Gene3D - 218 275 - -
Stsc91055g00002 352 MobiDBLite consensus disorder prediction 1 29 - -
Stsc91055g00002 352 MobiDBLite consensus disorder prediction 162 190 - -
Stsc91055g00002 352 FunFam Myb family transcription factor 217 275 - -
Stsc91055g00002 352 SUPERFAMILY Homeodomain-like 216 272 IPR009057 -
Stsc91055g00002 352 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91055g00002 Stsc-Chr91055 28786 34286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91055g00002 200 286 G2-like Transcription Factor Family AT5G16560 83.908 2.09e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc91055g00002 Myb_DNA-binding 1.6e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91055g00002 - - aprc:113868756 325.094