Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91047g00007 ATGAATGGAAGACGAGCCCTCAATAAGCGCCAACGCGATGCCGCCGACGACCAGCTTCGCACTGTCAAGAGGGAGCGCGTCGCCGCCGCAGAGGGCGCTGATGAGGCTGAGTCCTCGCTAGGCCAAGATCCGGCTAGTCGCCGGTTGATACGCTACGAGTTTCTGAAACTCAAGACTCTCATTAGCGAGAAAAAGGAAGACTTGATGAACGCCGATTCTGACAGGTTCGATTCCATCTTGAATAAGTTCAACAAGCTTCACGACCAAGTTCAGAAGCCTAGAGAGCAGGTTGCAGATGCAGAGGCGCTGCTGGAATTGACTCACAGTTTGGTGGCTTCGGTGAGGTCTATGGTGAATGGGAATGTTACCCCTGCTGAATTTGTTGGCTGTTTGATCAAGGAGTATGGCCAACCATCCATCCAAGATCCGGAGGAATACTCAATTGACTGGAAAAAACTTGGTCTTAATGTGTCCTCCATGTTTATGAGGGTTCCTGGTTGTTGCACCATGCTTGGTCCCATGGAGAGGGAGTTGAAGCAACGCAAGATCGGAGTTCCGAGGGTGCGAACAAGGCCGACAGCTGAAAGGGCTAGACCTCAAGAGGTTGTTCAGGCCCAAGAAAAGGAAAGAACTGATACTGACGAAAACATGAAAGTAATGTTTGACATCTTGGCAAAAATGAGACGTGTTCAACTTGAATGTCTGATTCTGAACAGAACATCTTTTGCTCAGACCGTGGAAAACTTGTTTAGCCTATCATTTTTAGTCAAAGATGGTCGGGCTCAGATCACGGTGGATGAAGACCGGACACACTTTGTTTCGCCCAAGAATGCACCATCGAGTGATGCTTTGAGAGCAAAAGAGGTATCTTTCACTCATTTCATGTTCAGACTTGATTTCCAAGATTGGAAGTTAATGAAGGATGTGGTGCCCGAGGGCAAGGAGTTAATGCCACATAGGACTCATTTTTGCACTGTTGTTGGTTCTCAACCACAGATGGGTGGTGATGGTTCCCCACCTCCTGTATCTGTCACACCTATCAGGAACTCTCAACCACAGATGGGTGGTGATGGTTCCCCACCTCCTGTATCTACCACACCTATCAGGAACTCACAACCACAGATGGGTGGTGATGGCTCCCCACATCCTGTATCTGTCACACCTATCAGGAAACTCTCTCGGAATCGAGGGCTGGTTGTGCAGAATGAAGGTGTGGTGGAAGAATCTCCCGAATGTGATGATGAAAAATCTTCCAGAGCAGCTGCAATCAGAAGGTGTAAGCGTAAACTTCCATAA 1296 0.4846 MNGRRALNKRQRDAADDQLRTVKRERVAAAEGADEAESSLGQDPASRRLIRYEFLKLKTLISEKKEDLMNADSDRFDSILNKFNKLHDQVQKPREQVADAEALLELTHSLVASVRSMVNGNVTPAEFVGCLIKEYGQPSIQDPEEYSIDWKKLGLNVSSMFMRVPGCCTMLGPMERELKQRKIGVPRVRTRPTAERARPQEVVQAQEKERTDTDENMKVMFDILAKMRRVQLECLILNRTSFAQTVENLFSLSFLVKDGRAQITVDEDRTHFVSPKNAPSSDALRAKEVSFTHFMFRLDFQDWKLMKDVVPEGKELMPHRTHFCTVVGSQPQMGGDGSPPPVSVTPIRNSQPQMGGDGSPPPVSTTPIRNSQPQMGGDGSPHPVSVTPIRKLSRNRGLVVQNEGVVEESPECDDEKSSRAAAIRRCKRKLP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91047g00007 431 MobiDBLite consensus disorder prediction 1 42 - -
Stsc91047g00007 431 MobiDBLite consensus disorder prediction 343 378 - -
Stsc91047g00007 431 MobiDBLite consensus disorder prediction 328 431 - -
Stsc91047g00007 431 MobiDBLite consensus disorder prediction 190 211 - -
Stsc91047g00007 431 MobiDBLite consensus disorder prediction 1 32 - -
Stsc91047g00007 431 Pfam Nse4 C-terminal 230 314 IPR014854 -
Stsc91047g00007 431 PANTHER UNCHARACTERIZED 11 415 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91047g00007 Stsc-Chr91047 21771 24578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91047g00007 9 430 Non-SMC Element family AT1G51130 43.750 2.19e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91047g00007 K22825 - gmx:100792117 416.772