Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91047g00006 ATGGATTATGAGACTGTGGGATTGGTGGTAGCTATGTTGGTGTGGATGGGTTGGGCAATGATCATAGAACGCAGGCACCGGAGAGTGGAGGAGCTAGGGCAGCTTCCACCGGGACCAAGATGGTGGCCGGTGGTCGGCAACATCTTCCAACTAGGTTGGTCCTTGTCACCACACGAGTCTTTTGCAAAGCTGGCTCGAAAACACGGTCCAATCATGACCCTCTGGCTAGGCTCCATGTGCACCGTCGTGGTCTCCTCCAGCGAGGCCGCGCGTGACATGTTCAAAAACAAGGACGCCGTCCTCGCTGGCAGAAAAATCTACGAGGCCATGAGGGGTCCTCACGGCAGCGAGGGCTCCCTCATAACCTCGCAGTACGGCCCGCACTGGCGCATGCTGAGACGACTCAGCACGAAAGAATTCTTCGTGACGAGTCGCCTCGATGCCATGCGGACCGTGCGCGCAAAATGCATAAAGCGCATGGTTCACAGGATAGAAAGCGCGGTCGGAGATGAATCCTCCGGCGGCGTTGAGCTAGGGAGATTCTTTTTCTTGATGGCGTTTAACTTAATTGGGAACTTGATATTCTCGAAGGATTTGTTGGAGGGTGAGGTGGAGAGAGGGGCGAGATTCTATCACCATGCGGTGAAGGTGATGGAGTATGCCGGAAAGCCGAATGTGGCGGATTTCATGGCGGTGCTGAAGTGGGTGGATCCGCAAGGCATACGGAGGAAGACTCAGCATCACGTGGAAAAAGCATTTGAGATTGCTGGATGCTTCATAAAGGAGAGGATGGAGAGTGGGTGTGGAAGGGGGATGAGTAAAGATTTCTTGGATGTGTTGTTGGAGTTTCATGGAGATGCTGCCACTGGCCCTTACACTTTCTCTCCAAGAACCATCAATGTCGTTGTCTTTGAAATGTTCACGGCAGGGACAGACACAACAACAAGCACACTGGAGTGGGCAATGGCAGAGCTTCTCCACAACCCGAGATCCCTGGAAAAGGTGCAGACGGAACTGAGGAGCAAGATAGGGCCCCACAGGGACATGCAAGAGAACGACGTCGACTATCTTCCCTATCTCAAAGCAGTGATCAAAGAAACCCTGAGGCTGCACCCACCTCTACCCTTCTTGGTTCCTCACATGGCCATGGACTCTTGCAACATGCAGGGCTACCACATCCCCAAGGACTCTCAAGTTCTGGTCAATGTTTGGGCCATTGGAAGGGACCCTAAGGCGTGGGACGCTCCATTGCTGTTCTGGCCAGAGAGGTTTATGCACATGGATAATTTGGATGTTGATTTCAAGGGTCACCACTTTGAGTTCATACCCTTTGGCTCTGGTAGAAGAATGTGCCCTGCCATGCCTCTTGCTTCTAGGGTGCTCCCACTTGCACTCGGATCACTGTTACACAAGTTTGACTGGGTTCTGCCACGTGGCATGAAACCACATGAGATGGACATGAGAGAGGGCATGGGAATTACTCTCAGAAAAGCTCTTCCTTTGAAGGCCATACCAATCCCTCACTACTAA 1530 0.5255 MDYETVGLVVAMLVWMGWAMIIERRHRRVEELGQLPPGPRWWPVVGNIFQLGWSLSPHESFAKLARKHGPIMTLWLGSMCTVVVSSSEAARDMFKNKDAVLAGRKIYEAMRGPHGSEGSLITSQYGPHWRMLRRLSTKEFFVTSRLDAMRTVRAKCIKRMVHRIESAVGDESSGGVELGRFFFLMAFNLIGNLIFSKDLLEGEVERGARFYHHAVKVMEYAGKPNVADFMAVLKWVDPQGIRRKTQHHVEKAFEIAGCFIKERMESGCGRGMSKDFLDVLLEFHGDAATGPYTFSPRTINVVVFEMFTAGTDTTTSTLEWAMAELLHNPRSLEKVQTELRSKIGPHRDMQENDVDYLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNMQGYHIPKDSQVLVNVWAIGRDPKAWDAPLLFWPERFMHMDNLDVDFKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLHKFDWVLPRGMKPHEMDMREGMGITLRKALPLKAIPIPHY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91047g00006 509 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 507 - -
Stsc91047g00006 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Stsc91047g00006 509 Gene3D Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 CDD CYP76-like 65 505 - -
Stsc91047g00006 509 Pfam Cytochrome P450 36 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 FunFam Cytochrome P450 76C4 27 504 - -
Stsc91047g00006 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91047g00006 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91047g00006 Stsc-Chr91047 18809 21377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91047g00006 4 508 Cytochrome P450 AT3G52970 59.203 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91047g00006 - - gmx:100778988 772.696