Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91046g00003 ATGTCGTCGTGTCTAAGTGGAGCTGGCGGAAGAACCTATGGCTTCGATTTGGAATTCGTTAAGTCCACATCGTCTCCATCAATCACCAGAACTTCACACACTTCATCTTCATCACCATCTTCAACCATCTCCGAATCCAGCAACAACACTCAGCTTGCAATCTCAACCCGTAAGCCAAGAACCGCAAGGAAGCGCCCCAACCAAATCTACAACGAAGCCGCGGCGCTTCTTTCCACCGCATACCCCAACCTCTTCTCAACAAACACGCTCAAAAGCTTCGCCAAACCATCCTCCCAATACAGTAACAGTATTAGTGTTTCCAATACGGCGTCGTTTTTGGACGACTCATCTGAGGAGGTGTTTTTGCCGTTCAGGGTGTTCGATACGTCGTCGTCGTTCCTGCTCCACCAGTACAAGCCGTCGGCGTGCTTTACGGTGGAGCCTAAGGTGGTGAGTGTGCAGCCATGCCAGAGCCCAGGGGAAATAAGCTCCAGGGTGAATTCATTGGAATTGGAGGACCATAATAATAACCACCATTGCGGTGGCGGAGAAGAGGATTTCGATGCGGAATCGATGCTCGACGAGGAAATCGAGGAGGGAATCGATAGCATCATGGGGAGCGGGGTTGAATTGGAATCATCCTCCATTGATGCGGCTTCTTCGGATAATAATCCGTGGAGTTCTTTTGGCGGGAAACTGGATTTCCGGCTAGGGTTGCGTAGGGCCGGCGTGAGGGCACTCCGCAGCGCCGACGACGGCAATTGGTGGAATTTACCGGCGGTTGATATCCTCCAGATATCGCCTAAGGTTGTAAGCATTAACAAGCCTGCGCCGCAACAACCACCGGTGGCTCCGGCAGCTGAAAAGGCGAAAAAGAAGAAGAAGAAGGTGGAGAAACCGAGCGTTGAAGTGAAGAATAAGATCGATGAATTGCCGAAAGTGAATAACAGTGAAGCCGCTGTTCCGAAATTGAATTCCGGATTGATGTTGAAATTGAATTACGACGGTGTCAGGGATAGTTGGTCCGACAAGGGCTCGCCGTTCGGCGATGACGCCTCAGCCTCCGATTCGCCGGGAAATGACCTCACCGCACGGTTGTCACAAATAGATTTGTTATGGGAGAACGGGGGAGTGAGAGAAGCTAGCGTGCTTCGCTACAAAGAAAAACGGCGTACACGCCTCTTCTCCAAGAAGATCAGGTACCAAGTAAGGAAGGTCAACGCTGATCGACGGCCCAGAATGCAGGTACGACCCAGCTGA 1260 0.5151 MSSCLSGAGGRTYGFDLEFVKSTSSPSITRTSHTSSSSPSSTISESSNNTQLAISTRKPRTARKRPNQIYNEAAALLSTAYPNLFSTNTLKSFAKPSSQYSNSISVSNTASFLDDSSEEVFLPFRVFDTSSSFLLHQYKPSACFTVEPKVVSVQPCQSPGEISSRVNSLELEDHNNNHHCGGGEEDFDAESMLDEEIEEGIDSIMGSGVELESSSIDAASSDNNPWSSFGGKLDFRLGLRRAGVRALRSADDGNWWNLPAVDILQISPKVVSINKPAPQQPPVAPAAEKAKKKKKKVEKPSVEVKNKIDELPKVNNSEAAVPKLNSGLMLKLNYDGVRDSWSDKGSPFGDDASASDSPGNDLTARLSQIDLLWENGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMQVRPS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91046g00003 419 MobiDBLite consensus disorder prediction 275 301 - -
Stsc91046g00003 419 MobiDBLite consensus disorder prediction 25 57 - -
Stsc91046g00003 419 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 417 - -
Stsc91046g00003 419 ProSiteProfiles CCT domain profile. 379 419 IPR010402 GO:0005515
Stsc91046g00003 419 MobiDBLite consensus disorder prediction 25 66 - -
Stsc91046g00003 419 Pfam CCT motif 379 417 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91046g00003 Stsc-Chr91046 15621 17541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91046g00003 328 417 C2C2-CO-like Transcription Factor Family AT1G25440 43.243 4.09e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc91046g00003 CCT 6.7e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91046g00003 - - adu:107496352 605.52