Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91044g00007 ATGGAACAAAAGAAATCTTCTATTGTGGTTTTATTCAGAGAGCTGAAGCCACACTTTCTGATGGTGTTAGCCCAAGTTGGCTATGCCTCCTTGTATTTCATCACTGAAGCTTCCTTCAACCATGGGATGAGTCCTTTCTTGTATGTAACCTACCGCCACATCGTCGCGGCAGTTGTCATGTTCCCTTTTGCATACTTTCTAGAGAGAAATGAGAGACCAAAGCTCACATTTCCTCTGTTCATGGAAATTTTTGTGCTTTCCTTGGTTGGTATTAGTGTACCTATCAATATGTACTTTGCAAGCCTGCAATACACTTCTCCAACCTTTGTTGCTTCCGTGGTCAACGTCGTAGCTTCCCTTACCTTCATCATTGCCGTAGCACTAAGGTATGAGGCTCTTGATCTTAGAGATCCCAGGGGAATAGCCAAAGTTATAGGGACCTTGGTGTCCTTTGCTGGTGTAATGACAATGACATTGTACAAAGGACCTGCCATGAGAAATTTGTGGCAGCCTGTAATTCATATTCAAGGAAAGAAAGCTGCAGCTGCAAATGAAAACTGGCTCAAGGGTTCTCTTCTTGCAGTTATAAGCTGTGTTGCATGGTCTGTTTGGTACATCATGCAGGCAGCCACTTTGAAAAGATATCCAGCACAGTTGTCCCTTACAACATGGATGTGCTTTGTTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAGTTATAGGACATAAACCTTCAGCTTGGAGTATAGGGTTCAACATTGACATGTGGTCCACATTATATGGTGGAATTGTGATATCTGGTTTGATAATATACATTCAGCTGTGGTGTACTGAGAAAAAGGGTCCAGTCTTTGTTACAATGACTACCCCTCTTTGTACCATACTTGCGGCAATTTTAGCATACTTTGTCTTTGGTGAGAAACTTTATCTGGGCAGCATCATAGGCGCAACTTTTGTCATCATTGGTCTGTACTTGCTGTTGTGGGGCAAAGAAGGCGACCAAAAGATTCATATCAAGACCAAACCATGCAGTGGTGAAGACCCAGAATGCAGACCACAATCAGTACCTTAG 1074 0.4283 MEQKKSSIVVLFRELKPHFLMVLAQVGYASLYFITEASFNHGMSPFLYVTYRHIVAAVVMFPFAYFLERNERPKLTFPLFMEIFVLSLVGISVPINMYFASLQYTSPTFVASVVNVVASLTFIIAVALRYEALDLRDPRGIAKVIGTLVSFAGVMTMTLYKGPAMRNLWQPVIHIQGKKAAAANENWLKGSLLAVISCVAWSVWYIMQAATLKRYPAQLSLTTWMCFVGAAQSAVFTVIVIGHKPSAWSIGFNIDMWSTLYGGIVISGLIIYIQLWCTEKKGPVFVTMTTPLCTILAAILAYFVFGEKLYLGSIIGATFVIIGLYLLLWGKEGDQKIHIKTKPCSGEDPECRPQSVP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91044g00007 357 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Stsc91044g00007 357 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020
Stsc91044g00007 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Stsc91044g00007 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 331 - -
Stsc91044g00007 357 PANTHER WAT1-RELATED PROTEIN 17 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91044g00007 Stsc-Chr91044 36585 38865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91044g00007 16 339 Nodulin-like Gene Family AT5G07050 42.643 1.87e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91044g00007 - - gmx:100527877 563.148