Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91044g00003 | ATGAATCAAGATGGGTCAAACGGTAGGACAAAGGATGACGGAGGAGATATCCGATATAGAGGTGTGCGCCGCCGTCCTTGGGGGAAGTTCGCAGCCGAGATTCGTGACTCCACTAGGCAGGGTCAGAGGGTTTGGCTTGGTACATTCAACACGGCCGAGGATGCAGCAAGAGCTTATGATAGAGCGGCTTATGCCATGAGAGGTGCATTTGCTATCCTTAACTTCCCAAATGAGTATCCTATGTCGGGTTACGGTAATAACCGCACCTGTGGCGGTGGCAGTGGCGCCTCTTATTCTTCCGGCGCTTCGTCTTCCTCTAGTTCAAGGCAGGGCGAAGTGTTTGAGTTTGAGTATTTGGACGACAAATTGTTGGAGGAGCTTCTTGAATGCGAAGAAAAGAAGAAAAATGGACCATGA | 417 | 0.5012 | MNQDGSNGRTKDDGGDIRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEDAARAYDRAAYAMRGAFAILNFPNEYPMSGYGNNRTCGGGSGASYSSGASSSSSSRQGEVFEFEYLDDKLLEELLECEEKKKNGP | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91044g00003 | 138 | SUPERFAMILY | DNA-binding domain | 18 | 77 | IPR016177 | GO:0003677 | |
Stsc91044g00003 | 138 | SMART | rav1_2 | 18 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | Pfam | AP2 domain | 18 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | Gene3D | AP2/ERF domain | 17 | 77 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | ProSiteProfiles | AP2/ERF domain profile. | 18 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | CDD | AP2 | 18 | 77 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | PANTHER | DNA-BINDING DOMAIN | 13 | 133 | IPR044808 | GO:0003700|GO:0009873 | |
Stsc91044g00003 | 138 | MobiDBLite | consensus disorder prediction | 84 | 110 | - | - | |
Stsc91044g00003 | 138 | FunFam | Ethylene-responsive transcription factor 2 | 18 | 77 | - | - | |
Stsc91044g00003 | 138 | PRINTS | Ethylene responsive element binding protein signature | 42 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91044g00003 | 138 | PRINTS | Ethylene responsive element binding protein signature | 19 | 30 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91044g00003 | Stsc-Chr91044 | 13928 | 14477 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91044g00003 | 13 | 135 | AP2-EREBP Transcription Factor Family | AT3G23230 | 63.492 | 1.02e-44 | 141 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Stsc91044g00003 | AP2 | 2.2e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91044g00003 | - | - | gmx:100775830 | 156.762 |