Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91044g00002 ATGGAGGACCACCACAAGGGGAAACAAAGCAAGGAGGAAAAGGGAAAGGAAGAGGTCAAGTACCGTGGCGTGCGGAGACGGCCATGGGGGAAGTATGCAGCCGAGATAAGGGATCCATCAAAGCAAGGGACAAGGTTGTGGTTGGGGACATTCGATACGGCTGAGGATGCAGCCAGAGCTTATGATCGTGCAGCCTTCAACCTTAGAGGTCACCTTGCGATCCTCAATTTTCCAAATGAATATTATTCTCAAATAAGGGGTTCACCACCCTATCCACCATATTTAGCATCGCCCTCTTCTTCTACTTCTTATTCATCTCAATGCCATGCTAGTGGAAGTTCCAATCCTACTTCTAATCACGGTCCTCCTTTTGAGATTGAGTACTATGATAATAAGCTGTTGGAGGACCTTCTTGAGTCAGAAGAGTTGAAGAAGAAAAAGAAAGGAAATTAA 453 0.457 MEDHHKGKQSKEEKGKEEVKYRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEDAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPYLASPSSSTSYSSQCHASGSSNPTSNHGPPFEIEYYDNKLLEDLLESEELKKKKKGN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91044g00002 150 PANTHER DNA-BINDING DOMAIN 8 138 IPR044808 GO:0003700|GO:0009873
Stsc91044g00002 150 MobiDBLite consensus disorder prediction 1 21 - -
Stsc91044g00002 150 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Stsc91044g00002 150 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Stsc91044g00002 150 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Stsc91044g00002 150 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Stsc91044g00002 150 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Stsc91044g00002 150 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Stsc91044g00002 150 MobiDBLite consensus disorder prediction 97 121 - -
Stsc91044g00002 150 MobiDBLite consensus disorder prediction 88 125 - -
Stsc91044g00002 150 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Stsc91044g00002 150 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Stsc91044g00002 150 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91044g00002 Stsc-Chr91044 6733 7185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91044g00002 18 145 AP2-EREBP Transcription Factor Family AT3G23230 62.500 3.63e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Stsc91044g00002 AP2 1.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91044g00002 - - cit:102611827 150.214