Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91042g00004 ATGCCTCATAGAGCAACTTACATTTTCCCTAGGCAATTCCCGGAGAGAGGGTTGGATGAGTCTGTGACGCAGAGATTGGATCACGAGAAGAAAAGACTCGTCAACTCTATCAAATCACCTGATAATAATAATAACAATACTTTCGGCGCTGAAAACGACGTCGTGTCTACAACAACTGCAAGTGACACACCTGTTACTACTGCTCCTCTTGCCAAGGACGACGTCGTCGTTTTTTCATCAGGGAAACACTCGGCAGTTTCTGACCTCTTCGCCGGTGCCGGGTTTTCCGGAGTAGGTGGATTCAGAAGAAAGAGCAAGCAAATCGCCGCTTTCTGTGACTGGATCAACGATAAGAAGCGTGATTCTGGTAACCGATTGAATCATCGCCGCCGTATCTTGGCGGCGGAGGAGGAGGAGGAGCATGACGAGCACGAGATGTTGCTTCCTCTGTCGGCGGCGACGGAGACGGTCAAAGATTCCAGCAGCAGCGGAGGCGTTGACCAGAGCTTCGATCGGCAGGTGTCGCTGCCACGGTTGTCAAGTGGAAGCAGCTACTCCGGGAGCTTGTTCTCCGGAACGACGACGTTCGACGGCACCGCCACATTCTCCAGCGACATTAACACCAAAGATGAAACCTCTTCCTCCTACGCAACAAGGAAGCACCACCACGACGAAGAAGAAGAGCAATATCACAACAACAACAACAACGACGATAACGGCTATGCTAGAAAGTATAGAGAAAGCTACTACCTCCAAGTCACGTTAGCGAAGAGGCTCACTTGCTTAGCAAGCCTCACCAACGAACCCGTTCTCATCACCGCAGCCGAAACTTGGGATGCTGAATCCGTTTCTTATCGTTTATGGGTGAGTGGGTGCTTGTCGTACACGGATAAGATATCAGATGGCTTTTACAACATTCTTGGTATGAATCCGTACCTGTGGGTGATGTGCAATGAGAACGAAGAAGGGAAGAAGCTACCGACGCTGATGTCGCTGAAAGCAGTTGAGCCGAGCGAAACCTCCATGGAGGTTGTCATCATTGATAGGAATGAAGACTCTCAGCTTAAGCAGCTTATGGAGAAAGCGCAGGAGCTGTATTGTCAATCCAAGAACTCGTTGTTGCTGGTTGAGCAACTCGGCAAGTTAGTTGCGGTATGCATGGGGGGTACCTTTCCGGTGGAGCAAGGGGAACTTCACAAGCGGTGGAAGATGGTTAGCAAGAGGTTGAGAAGTTTTCATCATTCCGTTGTGCTTCCTATTGGAAGCTTGTCTACTGGTCTGTGTAGGCATCGGGCCATTCTTTTTAAGAGATTGGCAGATTATGTAGGTTTGCCATGTCGCATTGCTAAAGGTTGTAGGGAATATGTTGTGGACCTAGTTGGAGAACCAGGCACTTTCCACGTGCCAGATTCCTCAATCAATGGGGCATATTTGTCATCCATTCCTTCTCCATTTCAAATTTCTCATTTAAAGGAATGCCAATCTCCATATCTGGCTAGTGAAGTATGTACCCAATCAGTACATTCAAATCTTACAGGATGTGTACAGGAAGGTCCTCAAGTAAAAGATACTAATTTGCTGAAAAATTATAAGAACTCCATTTCTGCTTCGGTTGATCAAAATTCTGGAGGTGTTTCTGAAGCTGTTCGTCCAGCCTCTGTAGCATCACATGAATATCCTGGAATTGTTAAAGATAAGGTGACAGCACAAGACATTTCTAACAATGAGATTATTATGAAGGAAAATTCTGGAGCAAAAGCCAGTTCTAAGCAATCTATACATAGCACAACCAACCAGTTAGCACAGGAGAAGGTAGGCAATAGATATGAGAACCAAGACGGTGCTGGAAATATTCCAAGATACGTGAATCTTGAACCATCACTTGCAATGGACTGGCTAGAGATAGCATGGGAAGATTTACGTATCAAAGAGCGTATTGGTGCTGGATCATTTGGGACAGTGTACCGAGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAGTTTTTAAGAGAGGTTGCAATAATGAAACGCGTTCGCCATCCAAATGTTGTGCTCTTCATGGGTGCAGTTACAAAACGTCCCCATCTCTCTATAGTTACAGAGTATTTGCCTCGGGGTAGTCTATTCCGCCTGATACATAGGCCAGCATCCGGTGAAATTCTTGATCCGAGGAGACGACTACGGATGGCTTTAGATGTGGCTAAAGGGATAAATTATCTCCATTGTCTGAAGCCTCCAATAGTGCACTGGGATCTCAAATCTCCAAACCTGTTGGTGGACAGAAATTGGACAGTAAAGGTGTGTGATTTTGGATTATCCAGATTTAAGGCGAACACTTTCATATCGTCGAAATCTGTTGCTGGAACACCTGAATGGATGGCCCCAGAATTTCTTCGTGGAGAACCGTCGAATGAGAAGTCTGATGTTTACAGTTTTGGTGTTATCATGTGGGAACTCGTAACCCTGCAACAACCATGGAGTGGACTTAGCCCTGCCCAGGTCGTTGGAGCTGTGGCTTTCCAGAATAGAAGGCTTGCTATTCCTCCAAACATCTCCCCAGTATTGGCATCTGTTGTGGAATCTTGTTGGGCTGATAATCCTGCAGATCGCCCATCTCTTCCTAGCATAGTTGAGTCACTAAAGAAGCTGCTAAAGTCCCCTGCAGATTCCATCAAAATGGGTGAGACAAAAGAGTAA 2739 0.4629 MPHRATYIFPRQFPERGLDESVTQRLDHEKKRLVNSIKSPDNNNNNTFGAENDVVSTTTASDTPVTTAPLAKDDVVVFSSGKHSAVSDLFAGAGFSGVGGFRRKSKQIAAFCDWINDKKRDSGNRLNHRRRILAAEEEEEHDEHEMLLPLSAATETVKDSSSSGGVDQSFDRQVSLPRLSSGSSYSGSLFSGTTTFDGTATFSSDINTKDETSSSYATRKHHHDEEEEQYHNNNNNDDNGYARKYRESYYLQVTLAKRLTCLASLTNEPVLITAAETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNENEEGKKLPTLMSLKAVEPSETSMEVVIIDRNEDSQLKQLMEKAQELYCQSKNSLLLVEQLGKLVAVCMGGTFPVEQGELHKRWKMVSKRLRSFHHSVVLPIGSLSTGLCRHRAILFKRLADYVGLPCRIAKGCREYVVDLVGEPGTFHVPDSSINGAYLSSIPSPFQISHLKECQSPYLASEVCTQSVHSNLTGCVQEGPQVKDTNLLKNYKNSISASVDQNSGGVSEAVRPASVASHEYPGIVKDKVTAQDISNNEIIMKENSGAKASSKQSIHSTTNQLAQEKVGNRYENQDGAGNIPRYVNLEPSLAMDWLEIAWEDLRIKERIGAGSFGTVYRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDRNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVIMWELVTLQQPWSGLSPAQVVGAVAFQNRRLAIPPNISPVLASVVESCWADNPADRPSLPSIVESLKKLLKSPADSIKMGETKE 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91042g00004 912 ProSiteProfiles Protein kinase domain profile. 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91042g00004 912 PRINTS Tyrosine kinase catalytic domain signature 821 843 IPR001245 GO:0004672|GO:0006468
Stsc91042g00004 912 PRINTS Tyrosine kinase catalytic domain signature 755 773 IPR001245 GO:0004672|GO:0006468
Stsc91042g00004 912 PRINTS Tyrosine kinase catalytic domain signature 714 727 IPR001245 GO:0004672|GO:0006468
Stsc91042g00004 912 PRINTS Tyrosine kinase catalytic domain signature 865 887 IPR001245 GO:0004672|GO:0006468
Stsc91042g00004 912 Gene3D Transferase(Phosphotransferase) domain 1 719 907 - -
Stsc91042g00004 912 SUPERFAMILY Protein kinase-like (PK-like) 619 893 IPR011009 -
Stsc91042g00004 912 FunFam Serine/threonine-protein kinase isoform 1 630 718 - -
Stsc91042g00004 912 MobiDBLite consensus disorder prediction 214 233 - -
Stsc91042g00004 912 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 196 899 - -
Stsc91042g00004 912 CDD STKc_MAP3K-like 646 894 - -
Stsc91042g00004 912 Pfam Protein tyrosine and serine/threonine kinase 640 894 IPR001245 GO:0004672|GO:0006468
Stsc91042g00004 912 MobiDBLite consensus disorder prediction 201 238 - -
Stsc91042g00004 912 FunFam Serine/threonine-protein kinase CTR1 719 904 - -
Stsc91042g00004 912 Pfam Ethylene-responsive protein kinase Le-CTR1 280 454 - -
Stsc91042g00004 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Stsc91042g00004 912 Gene3D Phosphorylase Kinase; domain 1 633 717 - -
Stsc91042g00004 912 ProSitePatterns Protein kinases ATP-binding region signature. 646 667 IPR017441 GO:0005524
Stsc91042g00004 912 SMART serkin_6 640 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91042g00004 Stsc-Chr91042 16716 22124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91042g00004 1 911 MAP Kinase Kinase Kinase AT4G24480 53.340 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc91042g00004 PK_Tyr_Ser-Thr 2.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91042g00004 - - gmx:100786546 1216.45