Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91036g00003 ATGGATAATAACAATGATTTGGAGAACAACAATTATGGCAAGGAGGAAGTTGCAAACAACAACAACAATGGTGGTATTTTTGGAAAGACACCGTCACTGGTGGTAAGAAAGAAGACATCATCAGAAGATTCAATCATTGTGAGAAACAATAGTAATGGTCGAATGGAAATGGTTAGGAGTTTCGTGACAAATTTGAGAGAGGTGTTTCTTGGAACTAAGCTTGTTGTGCTTTTTCCGGCAGTGCCTTTGGCTGTTGCTGCAGATTTCTATAGCTTCGGGAGGCCATGGATTTTTGCACTAAGCTTAATTGGACTTGCCCCGCTAGCAGAACGTGTCAGCTTCCTCACTGAGCAAATTGCTTACTACACTGGTCCAACAGTTGGAGGGCTTCTGAATGCAACATGTGGTAACGCAACGGAGATGATCATTGCATTGTTAGCACTGCGGAAGAACAAAGTGGATGTTGTCAAGTTCTCCCTTTTGGGTTCCATTCTCTCAAACCTTCTTTTGGTTCTTGGTAGTTCACTCCTTTGTGGTGGCTTGGCCAATCTTAAGAGGGAGCAAAGATTTGACAGGAAACAAGCAGATGTGAACTCACTGCTATTGTTGCTGGGTTTGTTGTGCCATTTGCTGCCATTACTGTTCAAATACGCATTAGCAGGGGGAAGTTATTCAATTGCCACTTCTACCCTTCAGTTGTCAAGAGCAAGCAGTGTTGTCATGCTAATAGCATATATTGTATATATTGTCTTCCAATTAAAAACTCATCGAGTAATATTTGATGCACAAGAGGAAGAAGATGAAGAAGAAAAGGCTGTTATAGGATTTTGGAGTTCATTTACATGGTTGGTAGTTATGACATTGATCATATCTGTGCTATCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGTATTTCGGTTAGCTTCATTAGCTTAATTTTGCTTCCAATTGTTGGGAACGCTGCTGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGTTGGACATATCTTTGGGTGTGGCTATGGGATCAGCAACTCAAATTTCCATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGCATTCGAATGGATCTGGACTTCAATCTTCTTGATACCGGGTGTCTTGCTTTGGCAATTATTGTTACAGCGTTTACTTTACAGGATGGAACTTCACATTACTTGAAGGGAGTTGTTCTTACCCTATGTTACATTGTAATTGCTGCGTGCTTTTTTGTTCTCAAAACTCCATTTACCGGCCCTGACATCGAAACTAAAACACCCTATCATGCTATGACAAACTAA 1335 0.4067 MDNNNDLENNNYGKEEVANNNNNGGIFGKTPSLVVRKKTSSEDSIIVRNNSNGRMEMVRSFVTNLREVFLGTKLVVLFPAVPLAVAADFYSFGRPWIFALSLIGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALRKNKVDVVKFSLLGSILSNLLLVLGSSLLCGGLANLKREQRFDRKQADVNSLLLLLGLLCHLLPLLFKYALAGGSYSIATSTLQLSRASSVVMLIAYIVYIVFQLKTHRVIFDAQEEEDEEEKAVIGFWSSFTWLVVMTLIISVLSEYVVGTIEAASDSWGISVSFISLILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGIRMDLDFNLLDTGCLALAIIVTAFTLQDGTSHYLKGVVLTLCYIVIAACFFVLKTPFTGPDIETKTPYHAMTN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91036g00003 444 FunFam Vacuolar cation/proton exchanger 125 268 - -
Stsc91036g00003 444 Pfam Sodium/calcium exchanger protein 96 253 IPR004837 GO:0016020|GO:0055085
Stsc91036g00003 444 Pfam Sodium/calcium exchanger protein 279 420 IPR004837 GO:0016020|GO:0055085
Stsc91036g00003 444 FunFam Vacuolar cation/proton exchanger 269 423 - -
Stsc91036g00003 444 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Stsc91036g00003 444 Gene3D - 125 275 IPR044880 -
Stsc91036g00003 444 NCBIfam calcium/proton exchanger 60 422 - -
Stsc91036g00003 444 NCBIfam calcium/proton exchanger 79 422 IPR004798 GO:0006816|GO:0015369
Stsc91036g00003 444 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91036g00003 Stsc-Chr91036 12614 17337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91036g00003 20 427 Antiporters AT2G38170 64.858 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91036g00003 K07300 - gmx:100802344 609.757