Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91031g00004 ATGGGTTCGAGTCGCTCAGATAATGGCAAAGAACGCCTGCGCTGGACACAAGAACTCCATGATCGCTTTGTGGAGTCTGTAAATAGGCTTGGGGGCCCTGACAGGGCAACACCAAAGGGAATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCACGTCAAAAGTCACTTGCAGAAATACCGGCTCTCCAAATTGATTCCAGAGTCTACCTCAAAAGCAAAGCTTGAGAAGAGAAGCATATCAAATACAATGCCGAATTTCAGTTCAACATGCATGTATGTAAAGTATGGATCTTTCATAGTTCAGAACGATGCCGACTTGGAGGTAATATTCCATTGCTGGAGGGATTTTTCAGAGGTCAGGACAACTGAGCTATATGCGAAGTTGGCAGACATCGTTTCTAGCTCCGATGGATCCAACCCGAACCCCACATCCGGTCACATAGGGGGTTCTTCGAGTTCAGCTCCAGTTGCCTATATTGTATCGGTGCTTCCACCATCTGTTGCGTCCCCTTCATTCGCGGCTGACCTACATCACGAATATGATGATGAGTGTGACTTGGGGGATAATTGCACCTTTGGTGAGCTAGTTGCGGCAGTGGCCAACAGTCTACACAACGTGCATACGGGAGTATAG 651 0.4747 MGSSRSDNGKERLRWTQELHDRFVESVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRLSKLIPESTSKAKLEKRSISNTMPNFSSTCMYVKYGSFIVQNDADLEVIFHCWRDFSEVRTTELYAKLADIVSSSDGSNPNPTSGHIGGSSSSAPVAYIVSVLPPSVASPSFAADLHHEYDDECDLGDNCTFGELVAAVANSLHNVHTGV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91031g00004 216 Gene3D - 9 70 - -
Stsc91031g00004 216 SUPERFAMILY Homeodomain-like 10 68 IPR009057 -
Stsc91031g00004 216 Pfam Myb-like DNA-binding domain 13 66 IPR001005 -
Stsc91031g00004 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 70 IPR017930 -
Stsc91031g00004 216 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 88 IPR044848 GO:0003700
Stsc91031g00004 216 NCBIfam myb-like DNA-binding domain, SHAQKYF class 10 68 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91031g00004 Stsc-Chr91031 33385 38958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91031g00004 9 74 G2-like Transcription Factor Family AT5G06800 65.152 1.21e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc91031g00004 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91031g00004 - - aip:107639556 179.874