Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91029g00003 ATGCCTAATGGGAGTCTAGAGACCTTGTTGCACAACACTATTGAAGATAGCGAATCCACAAATCCAAGTCTCAACCTTATTCAAAGAGTAAATATTACTCTTGATGTAGCGTTTGCATTGGATTATCTTCACAATGATTCAGGGGAAGCTGTAGTTCGTTGTGATATAAAGCCAAGCAATGTTCTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAAACTCATTCATGGTGCTGCAAGCCATTCTAGCAGTGGTCAAGCTAGCTCCTCTGCAATTAAGGGAACCATTGGATACATTTCACCAGAGTATGGAGCGGGTGGTTCTGTGTCAGCAGAAGGAGACATGTATAGCTATGGAATTCTTCTTTTGGAGATGCTCACTTCAAAGAAGCCAACTGATACCATGTTTGTTGAAGGTCTAAGCCTCCACAAGTTTTGCAAAATGGCAATTCCTGAAGGAATCACGGATATTGTTGATTCACAATTGCTAATTCCATTTGATGAAGGAGAGAAGAGAATCACACAACAGCAAAATGTGGAAGACACCATTGGAGAGTGTCTTGTGTTGTTTGCTAACATTGGAATTGCATGTTCTGAAGAATTTCCCTCTCAACGAATGGCCATAAAAGATGTCATAATGGAGTTACATGCAATTAAACAGAAGCTGCTTTCATAA 690 0.4043 MPNGSLETLLHNTIEDSESTNPSLNLIQRVNITLDVAFALDYLHNDSGEAVVRCDIKPSNVLLDDDMVAHLGDFGLAKLIHGAASHSSSGQASSSAIKGTIGYISPEYGAGGSVSAEGDMYSYGILLLEMLTSKKPTDTMFVEGLSLHKFCKMAIPEGITDIVDSQLLIPFDEGEKRITQQQNVEDTIGECLVLFANIGIACSEEFPSQRMAIKDVIMELHAIKQKLLS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91029g00003 229 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91029g00003 229 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 225 - -
Stsc91029g00003 229 Gene3D Transferase(Phosphotransferase) domain 1 1 228 - -
Stsc91029g00003 229 SUPERFAMILY Protein kinase-like (PK-like) 1 220 IPR011009 -
Stsc91029g00003 229 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 229 - -
Stsc91029g00003 229 Pfam Protein kinase domain 3 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91029g00003 229 SMART serkin_6 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91029g00003 Stsc-Chr91029 1410 2564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91029g00003 1 228 Receptor kinase-like Gene Family AT3G47580 43.043 2.47e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Stsc91029g00003 Pkinase 2.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91029g00003 - - ahf:112766492 360.533