Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91027g00001 ATGGGATCCAATGGTGAATACTGTGCTTCCAAATTGCTTGAATCTCAAACTCATGTATGGAATCACATTTTTAGTTACATAAATTCCATGTCCCTCAAATGTGCAATTGACTTAGGAATTCCAGAAGCCATACACAACTATGGCCAACCCATGCCACTTTCACAACTCATTTCTTCATTACAAATTCATCCCACCAAATCACAATTTATCCATCGCTTGATGCGGATTTTGACTCATTCTGGCTTCTTCTCTAAAGAAATTTCTTTAAAAAGCGAGCTAGAATCGAGTTATGCCCTAACCGATGCATCCAAATTGTTGCTTAAAGACCATCCCATGAGCCTTTCCCCTTTCCTATCCGCCATGCTTGATCCAATTTTAACAAAACCGTGGTACAAGTTGCCAGCATGGTTCCAAAATAATAGTCCCACGTCGTTCTACATGACGCATGGGATGACACTTTGGGACTATGCTAGCTTGGAGCCAACGCTCAATAAGTACTTCAATGATGCCATGGCGACCGATACTCCATTTATTACAAGTGTTTTGTTTGAGAAGTGTAAGGGTGTGTTTGAAGGGTTGGAGTCTTTGGTTGATGTTGGGGGAGGCACAGGAACCATGACTAAGGCTATTGCTGAGAAATTTCCACAAATGGAGTGCATTGCGTTTGATCTCCCACATGCTGTTAATGGCTTACAAGGAAGTGGGAATATAAAATATGTTGGAGGAGACATGTTTGAGTCAATTCCTCCTTCTGATGGCATATTGTTGAAGTTTATATTGCATGATTGGCCTGACGAGAAATGTATCAAAATACTGAAAAAATGCAAGGAAGCAATCACAAGAAGCAAGGAAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTTAGTGATGACGATGAAAAGATTGATGATGAAGATCATAAATCAATTGAAACACAACTTTTCTTTGATATGTTGATGATGGTTGAAGTCAACGGAAAAGAGAGAAATGAAAAAGAATGGGCCAACTTAATTTTCTCAGCTGGTTTCAGTGATTACAAGATATATTTCTCAGCTTTGGGATTAAGATCTCTCATTGAAATTTTTCCATAG 1095 0.3872 MGSNGEYCASKLLESQTHVWNHIFSYINSMSLKCAIDLGIPEAIHNYGQPMPLSQLISSLQIHPTKSQFIHRLMRILTHSGFFSKEISLKSELESSYALTDASKLLLKDHPMSLSPFLSAMLDPILTKPWYKLPAWFQNNSPTSFYMTHGMTLWDYASLEPTLNKYFNDAMATDTPFITSVLFEKCKGVFEGLESLVDVGGGTGTMTKAIAEKFPQMECIAFDLPHAVNGLQGSGNIKYVGGDMFESIPPSDGILLKFILHDWPDEKCIKILKKCKEAITRSKERKGKVIVIDMVVSDDDEKIDDEDHKSIETQLFFDMLMMVEVNGKERNEKEWANLIFSAGFSDYKIYFSALGLRSLIEIFP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91027g00001 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 364 IPR016461 GO:0008168
Stsc91027g00001 364 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Stsc91027g00001 364 Gene3D - 3 106 IPR036388 -
Stsc91027g00001 364 Pfam O-methyltransferase domain 130 345 IPR001077 GO:0008171
Stsc91027g00001 364 Gene3D Vaccinia Virus protein VP39 107 364 IPR029063 -
Stsc91027g00001 364 FunFam O-methyltransferase ZRP4 108 364 - -
Stsc91027g00001 364 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Stsc91027g00001 364 PANTHER O-METHYLTRANSFERASE 13 348 IPR016461 GO:0008168
Stsc91027g00001 364 PIRSF O-mtase 3 364 IPR016461 GO:0008168
Stsc91027g00001 364 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Stsc91027g00001 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91027g00001 Stsc-Chr91027 5702 9544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91027g00001 30 363 Monolignol Biosynthesis Gene Families AT5G54160 33.824 1.30e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91027g00001 - K16040 gmx:100781008 473.011