Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91026g00005 ATGCAAGCCTTAAGGGATGAAATCACAGGGCTCAATAGTTATTTTCTCCCTTCAGAAACATATAACTATACTACTACCACCACCATGATGCAAAATACCAACAATACCCTTACATCTTTTCCACCATTATACAATAACAACAACCAATTATACAATGGTAATTTCCTTAATCAAATGCTTCTTCTTAGCAACAATAGTCCTACTCAATCATCATGCATCAGCAGCAGCAACAACTCAACCTCTGATGAAGCCGACGAACAACAGCAACAACAAAGCCTTATCATCAACGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAATCGGCCCGCCGGTCGAGGATGAGGAAGCAGAAACACCTTGATGAGCTTTGGTCACAGGTTGTTTGGCTCAGGGACGAGAATCACCGGTTATTGGACAAATTGAACAATGTTTCTGAGTCACATGACAAGATTCTTCAAGAGAATGCTCAACTGAGAGAAGAGACTTCAGAACTTCGCCAAATGCTTTGTGACATGCAGCTACATAGTCCAATTTGCCCTCCTCCTTTGAGTCCTTTTCATCATCATCAAGATAATCATGATCAAGATATAGTAGAAGAAGAAGATCTCAACAAATATGATGATTCCTCAAACCAATCCACCACCACAAGTAACATGAACCTAGCAGGTTAA 675 0.4104 MQALRDEITGLNSYFLPSETYNYTTTTTMMQNTNNTLTSFPPLYNNNNQLYNGNFLNQMLLLSNNSPTQSSCISSSNNSTSDEADEQQQQQSLIINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRDENHRLLDKLNNVSESHDKILQENAQLREETSELRQMLCDMQLHSPICPPPLSPFHHHQDNHDQDIVEEEDLNKYDDSSNQSTTTSNMNLAG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91026g00005 224 SMART brlzneu 94 158 IPR004827 GO:0003700|GO:0006355
Stsc91026g00005 224 Gene3D - 96 152 - -
Stsc91026g00005 224 SUPERFAMILY Leucine zipper domain 98 147 IPR046347 GO:0003700|GO:0006355
Stsc91026g00005 224 Coils Coil 142 169 - -
Stsc91026g00005 224 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 116 IPR004827 GO:0003700|GO:0006355
Stsc91026g00005 224 Pfam bZIP transcription factor 98 156 IPR004827 GO:0003700|GO:0006355
Stsc91026g00005 224 CDD bZIP_plant_GBF1 99 150 IPR045314 GO:0003700|GO:0006355
Stsc91026g00005 224 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 96 159 IPR004827 GO:0003700|GO:0006355
Stsc91026g00005 224 MobiDBLite consensus disorder prediction 67 90 - -
Stsc91026g00005 224 FunFam BZIP transcription factor 96 147 - -
Stsc91026g00005 224 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 27 177 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91026g00005 Stsc-Chr91026 44446 45494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91026g00005 51 179 bZIP Transcription Factor Family AT3G30530 69.466 1.67e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc91026g00005 bZIP_1 2.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91026g00005 - - adu:107486353 287.73