Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91024g00004 ATGGCAAAGGGTGATGATGCCGTGAGAAGGAAGAAGAACAAAGCCATTTGCAAAAAACTTAGAAGAAAGAATGATTCTTCCACTGTCTCTGCCAAGGCAGCCGCTGCTATTGCCGCCAAGAAGCGCCGCAAGGCCGGTAAACGCCGCATGTGCCAGGGAATGTGCTTTAGTCTGCCTTCTCCAGATGATCCATTCAATGATCGTCATGGGAAAGAGGAACTCAAAAGAAAAGCTCCTGGAAAGAAAAAACTCGCCACAAAAGAAAAGGCTCCTCGTAGAGAGGAGAGTGCAGCTAAAAGGCAAAACACATTTGGGGGGAATATTTCTAAGAAATCAAATTGTTTGCAAGTGGAAAATGAGCCCATCATTGAGGTGCCCGACATGGCTGACCATTGTGGTGGTGCTCAACGACAAAATCGCAAATTGTCAGAGTTGCCTTCTAAGTTTGTCTTTATGTGTCTAAGTTCGATTGAAAATGCATTGTGCCATGATGATGCCTATTCTGGTCAAGAGGATAACATTTTGTCTGTTGACTCATGGGGATTAGAGTTTCTAAAGTGTTATTCTACCGGGAAAGATCTGATAGAAACCAGTGGAACCTCTGTCACTACTGAGCAGGTTGCTTGGATTGTTTCTGGTGCAGCTGATACGTTTGTGAGAAAAGAGAATCAAGGCTTATCTTTTGCCAGTCCTTTCCTTTTATTCCTTGTACCTTCCCAAGAAAAAGCTGTACAGGTCAGAACAGTGTGCAAGCCTTTGAAATCACTAGGAATACATACAGTGAGTATACATTCAGGTGCTGCTTTAGATCATCAAATTCAAGGGTTGAAAAGTTGTGAACCTGAGTTTCTTGTTTCTACTCCAGAGAGATTAATGGAGCTTCTATCATTGAAGGCCATTGACATATCTGATGTCTCCATATTGGTTGTTGATGGACTTAGTACCATTTGTAGTGCTGGTTACGCTGATACTATTAAATCCATCAAGACATTTATTTCTAGTGATCCTCACGTTTTGGTTTTCAATGATTCCTTTAAGCATAATTCTATCCCAATGGTTCGTCATCTTCTAAATGGGTCCATTTGTAGACTCTCACTCAGTGATACAATTACAAGCCTAAGTTCATGCATTATCCAGTCTGTCCAAGTGTGTACATCAGAAGAAGATAAGATTCTTAAGAGCACCGAAGCCCTTGATCAATTTCGGAGCAGCTCTTCTCATAATTCAAGCATGCTATATATCTTAAGGAAAGAAATCAAGTGTAATAAGTTGGTCAAAACTCTCAAAGCCAGGGGTTGTTGCATTTCACTTGATTCTGATGACAGAGTGGATTCAAACAGCAGATCAGGACCAGTGGTTTCTGCAATAGATTTGGAGCATCTTTCTACTACAGAAATAGGGCATTACAATGTTGTAGTCTTACCTAGTTTTGTACCTTCCATGGACACTTATATCCATATTTTGACAAACATGGCACGTGAAAGTGTCAATGGTGTTCTGCACAGTTTCTTAACAGCAGAAGACGGAGTACTAGCTGGACAGCTCATCGGCATTCTTGAACAATGTGAGCAGGAAGTACCTGAAGCCTTGCAAGATCTGCATCATAAATCAGAGATGAAGGAATGA 1626 0.4133 MAKGDDAVRRKKNKAICKKLRRKNDSSTVSAKAAAAIAAKKRRKAGKRRMCQGMCFSLPSPDDPFNDRHGKEELKRKAPGKKKLATKEKAPRREESAAKRQNTFGGNISKKSNCLQVENEPIIEVPDMADHCGGAQRQNRKLSELPSKFVFMCLSSIENALCHDDAYSGQEDNILSVDSWGLEFLKCYSTGKDLIETSGTSVTTEQVAWIVSGAADTFVRKENQGLSFASPFLLFLVPSQEKAVQVRTVCKPLKSLGIHTVSIHSGAALDHQIQGLKSCEPEFLVSTPERLMELLSLKAIDISDVSILVVDGLSTICSAGYADTIKSIKTFISSDPHVLVFNDSFKHNSIPMVRHLLNGSICRLSLSDTITSLSSCIIQSVQVCTSEEDKILKSTEALDQFRSSSSHNSSMLYILRKEIKCNKLVKTLKARGCCISLDSDDRVDSNSRSGPVVSAIDLEHLSTTEIGHYNVVVLPSFVPSMDTYIHILTNMARESVNGVLHSFLTAEDGVLAGQLIGILEQCEQEVPEALQDLHHKSEMKE 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91024g00004 541 MobiDBLite consensus disorder prediction 57 102 - -
Stsc91024g00004 541 MobiDBLite consensus disorder prediction 64 99 - -
Stsc91024g00004 541 Gene3D - 193 369 IPR027417 -
Stsc91024g00004 541 Pfam DEAD/DEAH box helicase 229 332 IPR011545 GO:0003676|GO:0005524
Stsc91024g00004 541 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 7 516 - -
Stsc91024g00004 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91024g00004 Stsc-Chr91024 15717 24537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91024g00004 234 533 Eukaryotic Initiation Factors Gene Family AT1G72730 21.290 2.57e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91024g00004 - - adu:107477540 923.694