Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91022g00002 ATGGCTGTGAACTCATCAAAGCAGCAGCATTGTTCTCTTGTGCTGTTATTACTGCAGCTTCTTGTTCTTGGGATCCTCTTGGAAGAAGCAAGTGCAGAAAAATGCAAAAGAAAATGTGGGTCCCTCGCCATTCCCTTCCCTTTCGGCACGACGGAGGATTGTTCCCTCGACACTTCGTTTCTCATTGACTGCAACACCAACAACAATACTCCGTATGTGCCGCAAACTAACTTAACTGTGCAGAGCATCTCCCTCAATGGCCAACTCCGAGTTTCTTTTCCGGTAGCCAGCTTTTGCTACACCGGCAAAAATGGTACCAAAGGCTTAGAAACCAACCAAACGAGTCAGCAACACAACCTCACACATTTCTCCATCTCCCCCACTCAAAACAAGCTCTTCGTTGTTGGTTGTAACACAATTGGAGCAGTGAATGCGTATGATTCAGAGGGGAAGAAGTACTACACAGGGTGCTTGGCATTGTGCAACACGCCTGACTATGCAACCAATGGCTCCTGCACGGGAGTGGGTTGTTGCGAGATTCCAATCATGGCGGCACAAGAGCTATCTAGCATCTTCTATGTTTCTCTTCGTGCCTTCACTAGCAACAGCTATGTCAGCAGTTTCAACCCCTGCAGTTATTCCTTTGTGGCGGAAGACGGAGCCTACAAGTTCTCCTCCTCGGATCTTGCCAAGTTCCACCATGCCACGTTTCCAACGGTGTTGGATTGGAGTGTGGGGAACCTGAGTTGCCAACAAGCCAAGAAGAACAAGAATCATGATTTTGCATGTAAGGCTGAGAATAGTGAATGTGTGAATGCAAGGGAAGATGGTTATCTATGCAATTGCTCTGCTGGTTTCAGTGGAAATCCTTACGTCCCTAACGGTTGCCAAGATATTAATGAATGCATGGAATCCAATGATTGCTATAGTAAAGCAATATGCCAAAACCTTCCTGGTAGCTATAGCTGCTCCTGTCCAAAAGGATATTCAGGAGATGGGAAAAAATATGGAACACAATGCCGACCCAATTCCAGTTCCAATTCCAGAGCAAAGAACATTTTGATCATTGCATTGAGTATTAGTGGAGGAGTGATAGCACTACTTGTGGTGAGCTTTTATGTGTATTGGAGAATGAAGCAAAAGAAGCTAACCGAGCTTAAAGAGCAATATTTTCAGCAAAATGGTGGCCTATTGTTACAGCAACTTATTGCTAGACAAAGAGAATCAACTGATGAAACAGCTAAAGTTTTCACTGTGGATGAATTAAACAAGGCCACTAACAACTTTGATGAAAGCAAGATCCTAGGTAAAGGGGGTCAGGGAACTGTTTATGAAGGACTATTATCAGATAACAAGACTGTAGCAATAAAAAGGTCCAAGATCAGTGACCCAAGTCAAATTGAACAGTTCATCAATGAGGTGGTTGTGCTTTCCCAAATCAACCATAAGAATGTGGTTAAGCTTTTGGGTTGTTGTTTAGATGCACAAGTCCCATTGCTTGTTTATGAGTTCATTCCTCATGGTACCATTTTTGAGCATCTTCATAGTCATAACCAATCCTTAAGGCTTTCTTGGAAAACAAGATTGAGAATAGCGGCGGAGACTGCTGGGGCTTTAGCTTACTTACATTCTGTTACTTCTCCTCCAATCATACACAGAGATGTGAAAACTACTAACATACTTCTTGATCATGATCTTGTAGCAAAGGTTTCGGATTTCGGAGCTTCGAGAATTGTTCCCCTTGATAAGACACAGTTAACCACATTGGTGCAGGGGACATTAGGGTATCTTGATCCTGAATACTTCCAAACAAGTCAACTGACTGAGAAAAGCGATGTTTATAGTTTCGGAGTTGTAATGGTAGAGTTACTAACAGGAAGAAAGGCGCTCTCTTTCGACATGCCGGAGAATGATAGAAATCTTGCATTGTATTTCATTTCTTCAATAAAAGGGGGGAATTTATTTGACATTGTGGACAACCATGTAATGAATGAGGCAAGGGTTGAGCAAATAATGGAGTTTGCTAATGTTGCAAAACGTTGTTTAAGAGTGATGGGAGAGAAAAGGCCTACAATGAAAGAAGTGGCAATGGAGCTTGAAGGACTCAGAGTTGAGGAAAATCATAGAAGAGAAAGTGATAAGTTATTGTATTCTGAAGAGACAGAGGAGTTGCTTAAATCAACGGTATCTACTACTTGCAATGTTGAAGATGGGAGTGGTGGAAGTGGCAACAGTTCCGGGGTTAATAGTAGCATTGGTCAGATTTCGATGTCATTGGGTGGAGGAAGATGA 2292 0.4263 MAVNSSKQQHCSLVLLLLQLLVLGILLEEASAEKCKRKCGSLAIPFPFGTTEDCSLDTSFLIDCNTNNNTPYVPQTNLTVQSISLNGQLRVSFPVASFCYTGKNGTKGLETNQTSQQHNLTHFSISPTQNKLFVVGCNTIGAVNAYDSEGKKYYTGCLALCNTPDYATNGSCTGVGCCEIPIMAAQELSSIFYVSLRAFTSNSYVSSFNPCSYSFVAEDGAYKFSSSDLAKFHHATFPTVLDWSVGNLSCQQAKKNKNHDFACKAENSECVNAREDGYLCNCSAGFSGNPYVPNGCQDINECMESNDCYSKAICQNLPGSYSCSCPKGYSGDGKKYGTQCRPNSSSNSRAKNILIIALSISGGVIALLVVSFYVYWRMKQKKLTELKEQYFQQNGGLLLQQLIARQRESTDETAKVFTVDELNKATNNFDESKILGKGGQGTVYEGLLSDNKTVAIKRSKISDPSQIEQFINEVVVLSQINHKNVVKLLGCCLDAQVPLLVYEFIPHGTIFEHLHSHNQSLRLSWKTRLRIAAETAGALAYLHSVTSPPIIHRDVKTTNILLDHDLVAKVSDFGASRIVPLDKTQLTTLVQGTLGYLDPEYFQTSQLTEKSDVYSFGVVMVELLTGRKALSFDMPENDRNLALYFISSIKGGNLFDIVDNHVMNEARVEQIMEFANVAKRCLRVMGEKRPTMKEVAMELEGLRVEENHRRESDKLLYSEETEELLKSTVSTTCNVEDGSGGSGNSSGVNSSIGQISMSLGGGR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91022g00002 763 FunFam Fibrillin 2 293 337 - -
Stsc91022g00002 763 Pfam Protein tyrosine and serine/threonine kinase 432 699 IPR001245 GO:0004672|GO:0006468
Stsc91022g00002 763 SUPERFAMILY EGF/Laminin 297 335 - -
Stsc91022g00002 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Stsc91022g00002 763 ProSitePatterns Calcium-binding EGF-like domain signature. 298 323 IPR018097 GO:0005509
Stsc91022g00002 763 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 314 325 IPR000152 -
Stsc91022g00002 763 SMART egfca_6 250 297 IPR001881 GO:0005509
Stsc91022g00002 763 SMART egfca_6 298 341 IPR001881 GO:0005509
Stsc91022g00002 763 Gene3D Laminin 301 342 - -
Stsc91022g00002 763 Gene3D Laminin 249 300 - -
Stsc91022g00002 763 Pfam Wall-associated receptor kinase galacturonan-binding 35 90 IPR025287 GO:0030247
Stsc91022g00002 763 FunFam Wall-associated receptor kinase 2 398 504 - -
Stsc91022g00002 763 MobiDBLite consensus disorder prediction 733 757 - -
Stsc91022g00002 763 FunFam Wall-associated receptor kinase 2 505 722 - -
Stsc91022g00002 763 SMART serkin_6 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91022g00002 763 Pfam Calcium-binding EGF domain 298 340 IPR001881 GO:0005509
Stsc91022g00002 763 SMART egf_5 249 297 IPR000742 -
Stsc91022g00002 763 SMART egf_5 301 341 IPR000742 -
Stsc91022g00002 763 MobiDBLite consensus disorder prediction 733 763 - -
Stsc91022g00002 763 CDD STKc_IRAK 435 702 - -
Stsc91022g00002 763 CDD EGF_CA 298 332 - -
Stsc91022g00002 763 SUPERFAMILY Protein kinase-like (PK-like) 413 699 IPR011009 -
Stsc91022g00002 763 ProSiteProfiles EGF-like domain profile. 298 341 IPR000742 -
Stsc91022g00002 763 Gene3D Transferase(Phosphotransferase) domain 1 505 724 - -
Stsc91022g00002 763 ProSiteProfiles Protein kinase domain profile. 429 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91022g00002 763 Gene3D Phosphorylase Kinase; domain 1 400 504 - -
Stsc91022g00002 763 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 31 707 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91022g00002 Stsc-Chr91022 17468 21160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91022g00002 10 732 Receptor kinase-like Gene Family AT1G21230 44.658 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc91022g00002 PK_Tyr_Ser-Thr 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91022g00002 - - aip:107607783 1339.71