Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91022g00001 ATGGTGGCCTATTACTACAACAACAAATCGCATCTTACAAAGGCTCAAACGAAACAACACCAAAAATCTTCACTATGGAAGAATTACAAGATGCCACCAACAACTTTGATGAAGCCAGGATCCTTGGCAAAGATTAACCATAGGAATGTGGTTAAACTCTTAGGCTGTTACTTAGAGACTGAGGTTCCATTACTTGTCTATGAGTATGTTTCAAACGACACTGTTTTTGATCGTCTTCATCATGATCATGAGTTAGATTGGAAAGTCAGATTGCGAATAGCTACAGAAGCTGCTGGTGCTTTGGCATACTTGCATTCTGCTGCTTCTGTGCCTATCATTCATAAGGATATTAAAACAAGCAACATATTGCTTGATCATAATTTGACTACAAAAGTCTCTGATTTTAGAACTTCAAGAATTATTCCTCTTGATCATACTCAATTAACCACTTTGGTGCAGGGGACACTAGGGTATCTTGATCCTGAATACTTTCACACTAGCCATTTAACTGAGAAAAGTGATGTTTATAGTTTTGGAGTAGTTTTGGCTGAGTTACTCACGGAAAGAAAAGCTCTTTCTTTCGCTCTACCAGAGATGGACAGAAACCTTGCTTTGTACTTTGTTTCTTCTATGGAAAAGGGTAATCTGCTTCAGATAGTGGACATATGCATATTAGAAGTGGCAAAAGTTGAAGAACTAATTGAGTTTGCTAATATTACAAAGTGGTGTTTGAGAGTGAAGAGAGAAGAACGACCTACCATGAAAGAAGTTGCCATGGGACTCGAGAGACTTAGAATTGACGAGAAAATCATTCTGGGAAGTAGTGACTTGTCAGCTTTAAAAGAAGCTAACACATCAGCATCAACTTTCCAGATTGAAGATGACAGTGGTGGACAAAATGGGGCGAGTTTTAGTACGCGCCGGTTTCACATAGGCTAA 939 0.3876 MVAYYYNNKSHLTKAQTKQHQKSSLWKNYKMPPTTLMKPGSLAKINHRNVVKLLGCYLETEVPLLVYEYVSNDTVFDRLHHDHELDWKVRLRIATEAAGALAYLHSAASVPIIHKDIKTSNILLDHNLTTKVSDFRTSRIIPLDHTQLTTLVQGTLGYLDPEYFHTSHLTEKSDVYSFGVVLAELLTERKALSFALPEMDRNLALYFVSSMEKGNLLQIVDICILEVAKVEELIEFANITKWCLRVKREERPTMKEVAMGLERLRIDEKIILGSSDLSALKEANTSASTFQIEDDSGGQNGASFSTRRFHIG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91022g00001 312 MobiDBLite consensus disorder prediction 290 306 - -
Stsc91022g00001 312 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 42 274 IPR045274 GO:0007166
Stsc91022g00001 312 SMART serkin_6 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91022g00001 312 SUPERFAMILY Protein kinase-like (PK-like) 42 261 IPR011009 -
Stsc91022g00001 312 MobiDBLite consensus disorder prediction 290 312 - -
Stsc91022g00001 312 Pfam Protein kinase domain 41 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91022g00001 312 FunFam Wall-associated receptor kinase 2 70 282 - -
Stsc91022g00001 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Stsc91022g00001 312 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91022g00001 312 Gene3D Phosphorylase Kinase; domain 1 13 69 - -
Stsc91022g00001 312 Gene3D Transferase(Phosphotransferase) domain 1 70 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91022g00001 Stsc-Chr91022 7023 8086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91022g00001 42 268 Receptor kinase-like Gene Family AT1G21240 60.435 1.55e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc91022g00001 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91022g00001 - - aip:107607783 320.857