Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91017g00003 ATGGGATTTAGAAACCTGGGGCCACTTGGATCTATTGTCAAGGAGGCGTGGGAAAAAGCATTCTCCGTCGGAAAGTTCTTCTGCTTTCTACATGTCGTTAACACCTATTTGGTCACCCCTGCTGTGACAATTGGTCCCAGCATGCTTCCTGCAATAGACATGACCCCAACCCTGTTTTTGTGTGAAAGATTCTCAACTAGATCTGGCAAACTTACTTGTGGAGATATTGTGATTATTCGCTCCCCTCAAAACCCTAAGAGGAGGCTGGCTAAACGATTGGTTGGAATGGAGAATGATACCATTACATACATTTCTAATCCTGATAAGCCTGATAAGCAGGAAACTATTGTGGTTCCAAAGGGTCACGTTTGGATACAGGGTGATGATATAAATAATTCCAAAGATTCAAGGAACTTTGGTGCTGTTCCTTATGGGCTGATTGAGAAGAGGCCATTTTGGAAGGTATTGCCAGCTAAAGACTTTGGACCTTTCTGGAAACATTAA 504 0.4286 MGFRNLGPLGSIVKEAWEKAFSVGKFFCFLHVVNTYLVTPAVTIGPSMLPAIDMTPTLFLCERFSTRSGKLTCGDIVIIRSPQNPKRRLAKRLVGMENDTITYISNPDKPDKQETIVVPKGHVWIQGDDINNSKDSRNFGAVPYGLIEKRPFWKVLPAKDFGPFWKH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91017g00003 167 Gene3D Umud Fragment, subunit A 32 166 - -
Stsc91017g00003 167 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 11 164 - -
Stsc91017g00003 167 CDD S26_SPase_I 40 147 IPR019533 GO:0004252|GO:0006465
Stsc91017g00003 167 Pfam Signal peptidase, peptidase S26 27 103 IPR019533 GO:0004252|GO:0006465
Stsc91017g00003 167 Pfam Signal peptidase, peptidase S26 113 147 IPR019533 GO:0004252|GO:0006465
Stsc91017g00003 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc91017g00003 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 42 58 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc91017g00003 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Stsc91017g00003 167 SUPERFAMILY LexA/Signal peptidase 35 165 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91017g00003 Stsc-Chr91017 21025 27816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91017g00003 48 164 MADS-box Gene Family AT1G29960 51.282 1.10e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91017g00003 K09647 - pvy:116144419 207.994