Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91016g00011 ATGAACAATTCCAATCCCGTTGTTCATACCTTCTCTCAGTTCTACCACAACTGGATTTGGAAGCTCCAACAGATCCTCCACCACCTTCTCCACGTTTCCAATCAGACTTCATACACATCAGAACAGGATCTTCGATCTCTCGTCTCCAACGTCACTACGCACTTCAAGGAGTACTACACCGTCAAATGGAGTTTGGCGCGGGAAGACGTTCTTGTGTTCTTCTCCCCGGTTTGGCTGAGTCCTCTCGAGAATGCGTACCTATGGATCACTGGCTGGAAGCCTTCCACTGCCTTCAAGGTGCTGGAGTCCCTCAAGAACAGCAACTTCTTCAACATGACGGAGGAGCAGAAAAGGAAGATAGAGGAGCTGAGGATGAGGACGAAGATGGAGGAAGAGAAGGTTGAGAGGGAGATGGAGAGGCAGCAGGTTGCCATGGCGGATTGGAAGATCGTGGAGCTGGCCAAGCTGTCCGGCAGAGCCACACGGAAGAAGAAGAATAATAATGAAGAAGAAGAGAAGGTGGTGGAGTTGGCGATGAAGAAGGTGTTTGGGGGATTGGAGAGAATAATGAAGGGTTCTGATTGTGTGAGGCTGAAGACGCTCAAAGGGATTCTAGATGTTCTTGAACCAATGCAGTGTGTGCACTTCTTAGCTGCAAGTATCGCTATGCAACTTCGCCTCAGGCAATGGGGGGAAAAGTACCATCTCATTCATCAATCTTTCAATTCACCCATCACAAAATCTGATTATACTATAATTAACTAG 765 0.4784 MNNSNPVVHTFSQFYHNWIWKLQQILHHLLHVSNQTSYTSEQDLRSLVSNVTTHFKEYYTVKWSLAREDVLVFFSPVWLSPLENAYLWITGWKPSTAFKVLESLKNSNFFNMTEEQKRKIEELRMRTKMEEEKVEREMERQQVAMADWKIVELAKLSGRATRKKKNNNEEEEKVVELAMKKVFGGLERIMKGSDCVRLKTLKGILDVLEPMQCVHFLAASIAMQLRLRQWGEKYHLIHQSFNSPITKSDYTIIN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91016g00011 254 ProSiteProfiles DOG1 domain profile. 8 237 IPR025422 GO:0006351|GO:0043565
Stsc91016g00011 254 Pfam Seed dormancy control 28 102 IPR025422 GO:0006351|GO:0043565
Stsc91016g00011 254 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 10 235 - -
Stsc91016g00011 254 Coils Coil 153 180 - -
Stsc91016g00011 254 Coils Coil 113 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91016g00011 Stsc-Chr91016 31869 32633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91016g00011 37 228 bZIP Transcription Factor Family AT5G06960 26.562 7.39e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91016g00011 - - gmx:100808459 303.523