Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91014g00001 ATGGAGAACAACAATCCTCACCACCAGGCCCAATCAGGCCCATACCCAGGCCCACCAACACTCCCAGCTCCCACCACCACCACCGCAGCACCACCACCTTCCTCCGCCGCACCGTTCCACCACCTCCTCCAGCAACAACAGCAACAACTCCAGATGTTCTGGTCGTACCAGCGCCAAGAAATCGAACACGTCAACGACTTCAAGAACCACCAGCTTCCATTGGCGCGCATCAAGAAGATCATGAAGGCCGACGAAGACGTCCGCATGATCTCCGCCGAAGCCCCAATCCTCTTCGCCAAAGCCTGCGAGCTTTTCATCCTCGAGCTCACGATCCGTTCATGGCTTCACGCCGAAGAGAACAAGCGAAGGACGCTTCAGAAGAACGACATCGCCGCCGCCATTACGAGAACCGATATCTTCGATTTCTTGGTTGATATTGTTCCCAGGGACGATATCAAGGACGATGCGGCGGCGCTCGGCGGAATTGTGGCGGCTGCGGCGGCCGCGGCTACTGCCAGTGGTGTTCCGTACTATTATCCGCCCATGGGCCAGCCCGCGGGCCCGCCTGGTGGGATGATGATTGGGAGGCCCGCAGTGGACCCGGCAACGGGGGTTTACGTGCAGCCGCCGTCGCAGGCGTGGCAGAGTGTTTGGCAGACTGCTGCTGAGGATGGCAGCTATGGTGGTGGCGCCACCGCCGCTCAAGGGAATCTTGATGGACAGAGCTGA 729 0.5981 MENNNPHHQAQSGPYPGPPTLPAPTTTTAAPPPSSAAPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDIKDDAAALGGIVAAAAAAATASGVPYYYPPMGQPAGPPGGMMIGRPAVDPATGVYVQPPSQAWQSVWQTAAEDGSYGGGATAAQGNLDGQS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91014g00001 242 MobiDBLite consensus disorder prediction 1 37 - -
Stsc91014g00001 242 SUPERFAMILY Histone-fold 29 143 IPR009072 GO:0046982
Stsc91014g00001 242 FunFam Nuclear transcription factor Y subunit gamma 40 149 - -
Stsc91014g00001 242 Pfam Core histone H2A/H2B/H3/H4 57 134 IPR007125 GO:0003677
Stsc91014g00001 242 MobiDBLite consensus disorder prediction 12 31 - -
Stsc91014g00001 242 Gene3D Histone, subunit A 38 149 IPR009072 GO:0046982
Stsc91014g00001 242 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 44 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91014g00001 Stsc-Chr91014 11831 15299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91014g00001 36 241 CCAAT-HAP5 Transcription Factor Family AT3G48590 84.211 8.65e-110 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Stsc91014g00001 Histone 2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91014g00001 - - pcin:129320575 314.694