Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91012g00001 TGGTCATTGATAGCGAGTCATTTGCCAGGAAGAACAGACAATGAAATCAAGAACTATTGGAACTCTCACTTGAGTCGCAAGATCTACAGCTTTCGGAGAGCAACTAACCTAGACACCACCCAAATAGGGCTCACCGATACACCCAATAGTAATAGTAATAATGTTCATCACATTTATCCAAAGCCTAAAGCCGGTAGAACAAGCCGTTGGGCCATGAAGAAGAACAAAACCTACATTCACACTAAAAAATCCAATAACAATAACAACCAAAATGAAAAAGACGAAATTGCCCTTCCCCAAGTTAGCCACAAAGAAAAAGATGACGTTGTTCCAACTCCACCAACACCTTCTCTTGAGAGTGAGGGTTTTTGCAACAAAATTGATGAGGATCTCATGGTCTTGGATTTGGACAATAATGACAACAACAATGGGGTGGAAAAAGAAAAAGAAAAAGAAGAAGTAGAGTGCCCTACGAGGGCGTATGAGAAAGAGAACAATGACACGTTGTTTGGGCCATATGATGAACAAGTTGGAGACATTACTGTAACTAATAATATTAATATTAATGGCGGTGGGGCGTTGAGTCTTGATGACATGATGGGCAATTTCATGTTGGAAGAAATAATATGTGGGGTTCACAACATAAATGAAGACATTGAAATCAATGATAATAACAACAATAACAATAATAATCATCATCATCATAGTAATAATAGTGACTATGTGAGTGAGGAGAGTGAAATTAACAATAAGATGGTTAGTGATGAAGAGTGGAATTTAGGGTTGGATGATGAATATTTGAATTGGGAGAGTGTTATGGAGTTCATGAATAATAATAATAGTAGTATTAATATTAATAATAATAATAGTGAGTCATCAGAGGGTTGTTATTTGGAGCAAAAAGAAAATTTGCTGACGTGGCTGTGGAAAGATGAAGATGATGATTGGGAAAGGGGATGCATGAAGATGGGAGAGAGCTTGGATATTGAGAAGCAAAATGATGATGATGTTGTTGCTTGGTTTCTCTCTTGA 1032 0.3711 WSLIASHLPGRTDNEIKNYWNSHLSRKIYSFRRATNLDTTQIGLTDTPNSNSNNVHHIYPKPKAGRTSRWAMKKNKTYIHTKKSNNNNNQNEKDEIALPQVSHKEKDDVVPTPPTPSLESEGFCNKIDEDLMVLDLDNNDNNNGVEKEKEKEEVECPTRAYEKENNDTLFGPYDEQVGDITVTNNININGGGALSLDDMMGNFMLEEIICGVHNINEDIEINDNNNNNNNNHHHHSNNSDYVSEESEINNKMVSDEEWNLGLDDEYLNWESVMEFMNNNNSSININNNNSESSEGCYLEQKENLLTWLWKDEDDDWERGCMKMGESLDIEKQNDDDVVAWFLS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91012g00001 343 MobiDBLite consensus disorder prediction 223 246 - -
Stsc91012g00001 343 Gene3D - 1 55 - -
Stsc91012g00001 343 MobiDBLite consensus disorder prediction 44 67 - -
Stsc91012g00001 343 MobiDBLite consensus disorder prediction 81 96 - -
Stsc91012g00001 343 Pfam Myb-like DNA-binding domain 1 24 IPR001005 -
Stsc91012g00001 343 SUPERFAMILY Homeodomain-like 1 29 IPR009057 -
Stsc91012g00001 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 28 IPR017930 -
Stsc91012g00001 343 PANTHER CYSTEINE AND GLYCINE-RICH PROTEIN 2 BINDING PROTEIN 46 303 - -
Stsc91012g00001 343 MobiDBLite consensus disorder prediction 80 121 - -
Stsc91012g00001 343 CDD SANT 1 24 IPR001005 -
Stsc91012g00001 343 ProSiteProfiles Myb-like domain profile. 1 24 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91012g00001 Stsc-Chr91012 3019 4051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91012g00001 1 94 MYB Transcription Factor Family AT5G49330 47.475 1.72e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc91012g00001 Myb_DNA-binding 6.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91012g00001 K09422 - gmx:100814275 161.384