Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91010g00002 ATGACAGCGCCAAGCATTTCCCGCTCAACAAAAACACTACCCACTCTCAACTCAATCTCACTGTCCCTTGGCCGAATATCTATAATAACATTCACTGAATCCCATAACTACCTCCGTTTCCCACACTCTTTTTTCAATCTCTCCCAGCGCCCTCGCTTCAATCGCAGTGCCGTCGTGTCTCTCCCAGCCTCCTCTTCCGCCGCCGACACCGTTACTTTCTCAGCCTTCAGATTTCTTCTTCTAGAAGAACCTTCCAACAAGTATCGTTCTCTCAATCCCCTTTTTTTCTCTTTCAGTTTCGTTGTTCATATCACCATGCCTGCAATTGCTGCTCCTTCCACTCCTAACAAGCGCAAGTTAAGATCTCACGCGCTCCCAACCGCCGAATCTCCTACCCCTTCCCCACCGAAACGGAAATCTCCCCGCCGATCTGCCATCGCCAGCCCCCATTCTGCCGCCAAGGGGAATGAAACTGTTGCTGATGAAAATCAAGGCGTATCACGGAAACCTGAACTTGTGAAATCATCACTTTGGAATCTGAAAGATGGTGAGCAATTGAGAATGGTGAAGGAGGCATTGCACCTTGCAACTGCACCTTCCACGGTTGTGTGTCGAGAAGAGGAGCAGGATATGATTTTGGGGTTCTGCAAGTCCTGCATTGAGCACGAGAAGGCTGGGAGCTTATACATATGTGGCTGCCCCGGAACTGGGAAATCGTTGTCTATGGAGAAAGTGAAAGAGTCTTTACTGAACTGGGCAAAAGAGGCAGGTTTTTCACTGCCAGATGTTTTATCAGTAAATTGTACATCCCTTGCCAATACATCGGATATTTTTACCAAGATACTTGGTTTAAGCCAATCACCGGGAAAAAGGATTTCAGCAACACCCTTGCAACAACTTCAGAACATGTATGCACAGAAATCTTCTACCAGGAATATGATGTTGATAGTTGCTGATGAATTAGATTACCTAATAACCAGAGACAGGGCTGTGCTCCATGACCTTTTCATGCTTACCACCTTCCCATTTGCCAGATGTATATTAATCGGGGTAGCAAATGCTATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACATCCCTGAATTGCAAGCCTACTGTTGTAACTTTTCGTGCCTACTCTAAAGATCAGATCCTTAGGATTCTTGAAGAAAGGCTAACTGAACTTCCTCACACTGTCTTTCAACGCCAAGCACTGGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGGAAAGCTCTTTGTATATGCAGGAGTGCAATAGAGATGCTAGAGGCGGAAATTAGAGAATCTGTGTGCAATTTGAATACTCCATTGGAAGAGAAATCATTCTCTGAACAAAATATGGCTACAGCTTCTGATCCTATGAAGAAGCAAGAATTTGATATTGTAAGGATTGACCATATGGCTCGTGCTTTGTCAAAGACATATAGATCACCAGTGGTGGATACGATACAGTCTCTGCCACATCATCAACAGATTATTCTCTGCTCATCCATGAAACATTTCCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTATATAAATCATACTCTGAGTTATGCAAATCGACACTTATTCCCCCAGCAGGAATATTGGAATTCTCAAACATGTGCAGAGTGCTTAATGATCAGGGGCTCATTAAACTAGGACCATCACGAGAGGATAAATTGAAAAGGGTAACTCCAAAAGTTGACGAGGCTGATATTACTTTTGCATTGCAGGGAATCAGGTTTTTTAGAAATTGTCTTCAATGA 1791 0.4405 MTAPSISRSTKTLPTLNSISLSLGRISIITFTESHNYLRFPHSFFNLSQRPRFNRSAVVSLPASSSAADTVTFSAFRFLLLEEPSNKYRSLNPLFFSFSFVVHITMPAIAAPSTPNKRKLRSHALPTAESPTPSPPKRKSPRRSAIASPHSAAKGNETVADENQGVSRKPELVKSSLWNLKDGEQLRMVKEALHLATAPSTVVCREEEQDMILGFCKSCIEHEKAGSLYICGCPGTGKSLSMEKVKESLLNWAKEAGFSLPDVLSVNCTSLANTSDIFTKILGLSQSPGKRISATPLQQLQNMYAQKSSTRNMMLIVADELDYLITRDRAVLHDLFMLTTFPFARCILIGVANAIDLADRFLPRLTSLNCKPTVVTFRAYSKDQILRILEERLTELPHTVFQRQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESVCNLNTPLEEKSFSEQNMATASDPMKKQEFDIVRIDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYSELCKSTLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTPKVDEADITFALQGIRFFRNCLQ 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91010g00002 596 FunFam Cell division control protein 369 495 - -
Stsc91010g00002 596 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 130 594 - -
Stsc91010g00002 596 Pfam AAA lid domain 402 435 IPR041083 -
Stsc91010g00002 596 MobiDBLite consensus disorder prediction 113 168 - -
Stsc91010g00002 596 SMART Cdc6_C_2 506 585 IPR015163 -
Stsc91010g00002 596 SUPERFAMILY "Winged helix" DNA-binding domain 491 594 IPR036390 -
Stsc91010g00002 596 CDD AAA 208 366 - -
Stsc91010g00002 596 Gene3D - 183 374 IPR027417 -
Stsc91010g00002 596 FunFam Cell division control protein 498 588 - -
Stsc91010g00002 596 CDD Cdc6_C 499 581 IPR015163 -
Stsc91010g00002 596 Gene3D - 491 581 IPR036388 -
Stsc91010g00002 596 Gene3D - 375 465 - -
Stsc91010g00002 596 Pfam CDC6, C terminal winged helix domain 506 584 IPR015163 -
Stsc91010g00002 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 442 IPR027417 -
Stsc91010g00002 596 FunFam Cell division control protein 183 368 - -
Stsc91010g00002 596 PIRSF Cdc6 59 596 IPR016314 GO:0006270|GO:0051301
Stsc91010g00002 596 Pfam AAA domain 223 340 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91010g00002 Stsc-Chr91010 24651 30315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91010g00002 106 595 Core DNA Replication Machinery Family AT2G29680 56.767 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91010g00002 K02213 - gmx:100791200 739.184