Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91008g00003 ATGTTTAACATATCGTCGAATTTGGTTATATATTTACCGTCGGAAAAATCCGACGCTAAATTCGACTGTATTACCGTCGAACAGAAAATCCGACGCTACAAATTTGCGTCGAGGAAGTTAACGTCGGAAAATAGGTCGACGCTAAATCCGACGGTTGGGATGACATTTGCAACATGTGCAGAAGCTAATGATTTCCACAAGGAGTATGTTAAACAAGCTGGATTTGCTACTAAAATCAGAAATTCACAGAGGAATAAAGAGACCAGTGCAATCAAGAATCAACTTCTCACATGTAATCGAGAGGAGAAAAGGACATCTGATATACCTGAAGCTGAGAAGACGAATCTGATGTCTCCGGCAAACTGTCCTGCAAGGATTTATGTCCACATTCAGAAGAAGACTCAACTTTATGTTATTTCCAAGGTTGTTTTGTAG 435 0.3977 MFNISSNLVIYLPSEKSDAKFDCITVEQKIRRYKFASRKLTSENRSTLNPTVGMTFATCAEANDFHKEYVKQAGFATKIRNSQRNKETSAIKNQLLTCNREEKRTSDIPEAEKTNLMSPANCPARIYVHIQKKTQLYVISKVVL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91008g00003 144 Pfam FAR1 DNA-binding domain 64 140 IPR004330 -
Stsc91008g00003 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91008g00003 Stsc-Chr91008 43240 44775 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc91008g00003 FAR1 1.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91008g00003 - - aip:110271906 96.6709