Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91007g00011 ATGGGGAAGACAGGGAAATGGCTTAGAAACTTATTGACGGGGAAGAAAGAAAAAGAGAAATACAAGGAAAAATGTGCAACCATTAGCCCAGTTGTTCTGTCAAATGGTACAGAAAATCCAACAACTCCCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCCACAGCTACAGCTTCCAAGGAATTGAATTTTGTAGAAGCAAAAGCCACTGCTGCTCCTGCCACAGATGCACAGAATGAACAGAAGAGGCATGCCATGGCCGTGATCAGCTTGACTTCCAGTTCTAATGAAACAACTAGAAGCATTGACGAAGCTGCTGCCATTAAAATTCAATCTGTGTTTAGGTCCTACTTGGCAAGAAAAGCATTGTGTGCTCTTAGAGGGCTAGTGAAGTTGCAGGCACTGGTAAGGGGTTACTTGGTGAGAAAACAGGCCACAGATACATTAAGGTGCATGCAGGCTTTGGTCATAGCTCAAGCCAGAGCTCGTGCTTCAAGGGTTCAAACTGAATCAGAAGGGAAGCTCAATCCAATGCATTCAACCTACAGAAAAACATTATTAGCGGATAATGTGTTCAGGCATATGTATAATGAAAATGAGAGAGGCATGGAAGACAGCATCAAGATTGTGGAGATGGATGTTTGTGAATCCAAAGGAAACTCAAGAGGAAGAAACAGCACATCCAATCACGGATACCGCCATAGATATTCAACATATTATTCACCAAATGGCTCTTCATACTTAAAAGAAGGAGGCAGCTACAAGGCATCGCCAGCACCTTCAGCAATGACAGAGTTCAGTCCAAGAGCATGCAATGGCCACTTTGAGGATTGTGGAGCCTTCAACACAGCACAAAGCAGTCCTCATTATTACTCAGCAGTTTCAAGAGAAGACGTTTTGAATCTTCCGTTTGCTTTTCCTAAACCAAATTATGCAGCAGAGTCCATGTTCTATGACTACCCTTTTTTCCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTTAGATCACATAGTGCACCAAGGCAAAGGCTGGATTCATTCGAGAGGCAGCCGAGCAGGCGAAGAGCTTCGGTGGAAGGAAGAAGTGTCCAGAGGCCTATGAGGATGCAGAGGTCATCTTCAAATGTTGGTCTCACTGCACAAAACTACCAATATCCTTGGTCAATGAAGCTGGATAGGTCAACTGTTTCCCTCAAAGACAGTGAGTGTGGCTCTTCAACTTCAGTGCTCACAACCCCCAATTACTGCATATCTTTTGCTGCATATGATCCTCATGGACATAGGTACTAA 1305 0.4391 MGKTGKWLRNLLTGKKEKEKYKEKCATISPVVLSNGTENPTTPKEKRRWSFRRSSATATASKELNFVEAKATAAPATDAQNEQKRHAMAVISLTSSSNETTRSIDEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGYLVRKQATDTLRCMQALVIAQARARASRVQTESEGKLNPMHSTYRKTLLADNVFRHMYNENERGMEDSIKIVEMDVCESKGNSRGRNSTSNHGYRHRYSTYYSPNGSSYLKEGGSYKASPAPSAMTEFSPRACNGHFEDCGAFNTAQSSPHYYSAVSREDVLNLPFAFPKPNYAAESMFYDYPFFPNYMANTESSRAKVRSHSAPRQRLDSFERQPSRRRASVEGRSVQRPMRMQRSSSNVGLTAQNYQYPWSMKLDRSTVSLKDSECGSSTSVLTTPNYCISFAAYDPHGHRY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91007g00011 434 MobiDBLite consensus disorder prediction 336 379 - -
Stsc91007g00011 434 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Stsc91007g00011 434 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Stsc91007g00011 434 SMART iq_5 127 148 IPR000048 GO:0005515
Stsc91007g00011 434 SMART iq_5 104 126 IPR000048 GO:0005515
Stsc91007g00011 434 Gene3D - 105 156 - -
Stsc91007g00011 434 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Stsc91007g00011 434 MobiDBLite consensus disorder prediction 33 53 - -
Stsc91007g00011 434 PANTHER IQ-DOMAIN 5-RELATED 1 365 - -
Stsc91007g00011 434 MobiDBLite consensus disorder prediction 339 366 - -
Stsc91007g00011 434 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Stsc91007g00011 434 Pfam Protein of unknown function (DUF4005) 305 368 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91007g00011 Stsc-Chr91007 29601 31347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91007g00011 1 420 IQD Protein Family AT4G14750 43.792 5.82e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91007g00011 - - gmx:100817667 528.48