Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91004g00007 ATGATGATGAGTTTAGAAGAGTGCAATGGGAGTTATATGAAACACAAGGCTTTGTTTGTGTTTGGAGATTCACTTTATGACCCTGGTAACAACTTATATCTCCAACAAAAAAACCGATCATTATTACCTTCAGATCACTATCCATATGGCAAAACATTCTTCAACCACCCCACTGGAAGATTCTCAGATGGCCGTATAGTTCCTGATTTCATAGGGTTACCAATTCTGTCGGCATATCTGAAGGCACAGCATACACCTTTTACTTATGGTGCAAACTTCGCTTCTGCTGGCGCGGCTGTCACCATTGCTTCAAATTCTAATATTTGGCTTCCAAGGCAAATGAGGTATTTCAAGGAGGTAGTGAAATCCTTGAGACAAGAAGTTGGATATATAAGAGCAGAGAGAGTTTTGAAAGATGCTGTGTACTTGTTCAGTATTGGAGGTAACGACTACAATGTACTTCACATGCTAAATCCCAACGCTACCAAATCATACAGAATGGCATTCATTAACAAAGTCGTTAGGAACCTCACCACTGTCTTCAAGGAGATATATAGTATAGGAGGCAGAAAATTCGGATATCAAAATGTTGGACCATTGGGTTGTTCACCAATAAGCAGAGTAATAAGCAGTGGTGATTGTGATCCAATCTTAATGGAAATGGCATCACAACACAACAAAGCTTTTGCTAAAGCTCTCAACAACTTACATCACCACCTTCCAGGATTCAGATACGCACTCTTTGATTATTATAATGCACTCTTAGACAGAATCAACCATCCTTCCAAATATGGACTTAAGGAGGGGAAGGTAGCATGTTGTGGAAATGGTCCCTATAGAAGAATGGGTTGTGGAAATGGGAAGAAATTCGAGGTATGCAAGAACCCATCTGAATATGTATGGTTTGATTTTGCTCATCCAGTTGAGAAGGTCAATAACCAAATTGCCATGCTTCTTTGGAATGCTTCGCCAAATGTCACTGCACCCTACAATGTTGCCCAGTTATTTAACTACTAG 1017 0.3992 MMMSLEECNGSYMKHKALFVFGDSLYDPGNNLYLQQKNRSLLPSDHYPYGKTFFNHPTGRFSDGRIVPDFIGLPILSAYLKAQHTPFTYGANFASAGAAVTIASNSNIWLPRQMRYFKEVVKSLRQEVGYIRAERVLKDAVYLFSIGGNDYNVLHMLNPNATKSYRMAFINKVVRNLTTVFKEIYSIGGRKFGYQNVGPLGCSPISRVISSGDCDPILMEMASQHNKAFAKALNNLHHHLPGFRYALFDYYNALLDRINHPSKYGLKEGKVACCGNGPYRRMGCGNGKKFEVCKNPSEYVWFDFAHPVEKVNNQIAMLLWNASPNVTAPYNVAQLFNY 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91004g00007 338 CDD SGNH_plant_lipase_like 17 323 IPR035669 -
Stsc91004g00007 338 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 337 IPR044552 -
Stsc91004g00007 338 Gene3D SGNH hydrolase 11 326 IPR036514 -
Stsc91004g00007 338 Pfam GDSL-like Lipase/Acylhydrolase 18 318 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91004g00007 Stsc-Chr91004 19726 30849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91004g00007 3 319 Pollen Coat Proteome AT1G75910 32.544 7.43e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91004g00007 - - ccaj:109809247 367.466