Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91004g00003 ATGGTGGTTCCACTCTTAACTGTAACCCTCCCTTGTGCTATTCATGGAGCTACACTCTCTCAGAGCAAACAACTAACTCTTCAATGCACAAATCACCAGGACATATTACAGGGTAGTTTCATAACATTAAGGAGGAGCCTTATTCTTTCTTCTTTTGTATCAACTTGTGTTTTTCCAACCTTATCTTCTTATGCCAAGACTAAGACTAAGAATCCATATGATGAAAAACGCCTCCTTCAACAAAATAAACGGATACAGCAAGAAAACAATGCACCTGAGGGTTTCCCAAATTTCATCAGAGAAGGTTTTGAAGTTAAAGTAGTAGCACCGGATAACTATACGAAGAGCGATTCGGGCCTCATATACCGGGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTAACCTTTCACTATGTCGGATATAACGAATCGGGCCGTCGTATAGACAGCACTTACTTACAGGGTTCTCCTGCCAGAATCCGAATGGGAACTAAAGCATTGGTTCCTGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGGCCGCCAGTTGGACCTTCAACCTTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTGTTAAGCATACAGAACTGTGAAAGGAGGACCATAGCTTTCTACTCTGATGTTGTATGCAACTGA 720 0.4139 MVVPLLTVTLPCAIHGATLSQSKQLTLQCTNHQDILQGSFITLRRSLILSSFVSTCVFPTLSSYAKTKTKNPYDEKRLLQQNKRIQQENNAPEGFPNFIREGFEVKVVAPDNYTKSDSGLIYRDFEVGKGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPARIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVVCN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91004g00003 239 Gene3D - 80 231 IPR046357 GO:0003755
Stsc91004g00003 239 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 133 219 IPR001179 GO:0003755
Stsc91004g00003 239 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 136 223 IPR001179 GO:0003755
Stsc91004g00003 239 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 36 239 IPR044239 -
Stsc91004g00003 239 SUPERFAMILY FKBP-like 58 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91004g00003 Stsc-Chr91004 4656 7126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91004g00003 126 225 Calmodulin-binding Proteins AT5G48570 32.353 7.59e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91004g00003 - - gmx:100305486 385.185