Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc909g00005 ATGGGACTCAAATATCTTCCTCTCAAGCTTAAGGTTTTCCGGCTGAAACGGTTCCTGCTAGGCCGCGGCCACAGAGGTGTAAAGAGAAAGCATGTGATGATGCCTGCAAAGAAGCCTTCATGGATGATGCCAGTAACACATGGATATTATGTGGTGGAACATCATCAAGGTTCTGAGAAAGATGTGTTGAACTTTGATTCAGTTGTGGTTCAAAGAGAGCAAATGGATCATAATGAATTGTGGTATTTCGGAATCTTTGATGCTGTAGTTGGAGATTGCGTTACCAAGTTCATGCAGTCCAATTTCTTCAACAAGAAGCTTCAAGAGTCTCATATAAGGAGGAAAAGCAAGGAAACACTGAAGAGAGCATACCTCGGTGCAAGGGCGAAGATAAGAGAGGAATATGAAGCAGATGAAAGAAGCAGAATGGGTGCAGGATCATGTGTTATGGTGATAAATGGAGAGAAGCTTGTGATAGCAAACATGGGAGATTACAGAACTGTTGTATGCAGAGATGGCATAGCTCATCATTACACATCATCTGGCAGACACCACCAACATTCATCGAAAACACATTGGTCTCGCAGACTCTTTCCAGGTAAAAGTCATTCTAGAGGCTCAGAACTTGTTGTCAAAGGAGAAAGGATTGATTCAGATACTGAGTTTCTGATATTGGCCAGCAATGGTATATGGGAGGTGATGCAGAACCAAGAGGCAGTGAATCTGATAAGTCACATAGAGGATCCACAAGAAGCAGCAGAATGCTTGGCAAAGGAAGCTATGAATAGGATGAGTAGAAGCAACATCTCATGCTTAATCATTCGCTTTGAATGA 834 0.4245 MGLKYLPLKLKVFRLKRFLLGRGHRGVKRKHVMMPAKKPSWMMPVTHGYYVVEHHQGSEKDVLNFDSVVVQREQMDHNELWYFGIFDAVVGDCVTKFMQSNFFNKKLQESHIRRKSKETLKRAYLGARAKIREEYEADERSRMGAGSCVMVINGEKLVIANMGDYRTVVCRDGIAHHYTSSGRHHQHSSKTHWSRRLFPGKSHSRGSELVVKGERIDSDTEFLILASNGIWEVMQNQEAVNLISHIEDPQEAAECLAKEAMNRMSRSNISCLIIRFE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc909g00005 277 Gene3D - 206 277 IPR036457 -
Stsc909g00005 277 ProSiteProfiles PPM-type phosphatase domain profile. 64 276 IPR001932 -
Stsc909g00005 277 SMART PP2C_4 45 274 IPR001932 -
Stsc909g00005 277 MobiDBLite consensus disorder prediction 180 199 - -
Stsc909g00005 277 SUPERFAMILY PP2C-like 46 276 IPR036457 -
Stsc909g00005 277 Gene3D - 45 197 IPR036457 -
Stsc909g00005 277 CDD PP2Cc 64 276 IPR001932 -
Stsc909g00005 277 PANTHER PROTEIN PHOSPHATASE 38 276 IPR015655 GO:0004722|GO:0006470
Stsc909g00005 277 MobiDBLite consensus disorder prediction 180 204 - -
Stsc909g00005 277 Pfam Protein phosphatase 2C 215 269 IPR001932 -
Stsc909g00005 277 Pfam Protein phosphatase 2C 74 180 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc909g00005 Stsc-Chr909 21876 23248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc909g00005 1 276 PP2C-type Phosphatase Gene Family AT3G23360 47.719 1.10e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc909g00005 K19704 - gmx:100780639 357.066