Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90990g00005 ATGGCTGCAAAACTTTATGGTGGAGCTTACCTCTCTTCCTTTGTTGATGCTGTTTTGGACAACCTGTCTAAAATACTTGAAGATGATGACTCTGTCCTGAAAGGAAACTACACTGCTTTGGAGTTGCTTGAAAGGTTGGAGAAATGTCTGTTTGAGGTTGGACCTTTTCTTGATGATGCTGAGCTGAAGCAGTTCACTAACAAGAGAGTCAAGGTGTGGCTTGCTGATCTCCAAGATGCTCTCTATTTGGCTGATGACTTGCTCGATGAACTCTCCACAAAATCTGCCACTGCTACTGCCTCTCAAAGGGATCCAGCAGGTATCTCTTCTTACTGTATTTCTGTTGTTGATTCAATCTTGGAAGATAGTCGTGAAATGGAGGACATAGCTCGAAAACTAGAGAATATCGTAGCACGCAAAGGTTATCTTCCTCTGGAGAAGACTGCCATGGTGGACATCTCATCATGGAGAACTCCATCCACATCTCTCGTTGTAAGTTCTGACATATTTGGTCGGGACAAAGACAAGGAGGAGATAATCAAATTGCTGTTAGCTGATACTTGTCATGCTCAATCACCTTTTACTGTTATCCCAATTTGGGGTATGGGTGGCATAGGAAAAACTACCTTGGCTCAACTGGTTTACAGTGATGACAAAGTGGTGGAATATTTTGACACTAGAGTATGGGTTTGTGTAGCTGAAAATTCAGACCCTATTCATGTTACAAGGACAATAATAGGGGCAATAGATCCTAGTCCCTGCAGCATGGACAGTTTTGATGTTCTTCAGACAAAGTTGAAGGGCAAGTTGATAGAAAAGACATTCTTAGTTGTTTTAGATGATGTCTGGCATAGTGGACGAGTCACATGGGAGAAATTTCTAGAACCTTTTCAACATGGGAATAATGGAAGTAGAATTCTGTTAACAACCCGTATTGAAAAGGTTGCTTCTACGTTCGCTGCTACCAGTCAACATTATCAACTAGATTTATTGTCCGATGAAGATTGTTGGTCGGTGTTTTTGAAGCATTCATCTATTTCTACTAATTTAGAACAATATGCAACTCTAGAACCAATTGGTAGAAATATTCTTGAAAAGTGTAAGGGATTACCTTTGGCTGTGAAGACACTTGGAAGTTTATTGCGCAACAAGTATGATGCAGGGCATTGGAAGAAAATACTTGAAAGTGAAATTTGGGAGCTCCCGGAAGATGAAAGTGAGATTGTTCCCGCACTAAGAGTAAGTTATCACTACCTCCCTTCATATTTAAAACGATGCTTTATTTATTGCTCATTATACCCCGAAGATTATCAATTTGATAAAGACGAATTAATCTTGCAATGGATGGCTGAAGATCTCTTACCACCAATGGAAAACGACACATTAGAGAATATTGGTTCCGAATGTTTTGATGAATTAGTTGCAAGGTCTTTTTTTCAATCTTCCAGTGCTTCCACTGGATTATTTGTAATGCATGATCTCATGCATGATCTTGCAACGTTTTTTGCTGGAAGATTCTTTTTCAGAGAATTTGGCAACCAACGCATGGTTGACAGCAAAACTCGTCATTTGTCATGTGATCGGGATCCAATTTCAAGATTTCCAGAGGGCTATGATGGAGTAATACACATGAGAACATTTCTATGTTTTGATGTTAAATCAACTGAAATCGAGGTGAAATCAAGGTGTTTAAGACTTTTGGCATTTCAAAAGTGTGAAATCCTGTCATTGCCTGATTCAATAGGTGAATTGATCCATTTGCGTTATTTGAATCTCTCTTCCACACCTATTGTCACATTGCCTGAATCATTGTGTAAATTATACAATCTCCAAACGTTGAAGTTGAGAGATTGTGATAAGCTTGAAATGCTTCCTCGTGTGCAAGATCTTGTAAACCTGCGCCACCTTGATATCAGAGGAACATCTTGTTTGAAAGAGATGCCGAAGGGAATGAGCAAGTTAAAACATTTGAATTTGTTAGGATTCTATGTTGTGGGAGAGCATGAAGAGAATGGGATAGGAGAATTGGGTCCAATTGATGTTCATGGCTCATTTCGCATTTCCAAATTAGAGAATGTGAACAACAGCAGCCAAGCTTCGAAGGCAAATATGGGTAGCAAGAAGCACATCAACGTTTTAGAGTTGAAATGGCGTTATTACGCTGATACTATGAGTGTTGAAACTGAAAGGGATATACTTAAAGAGTTACAACCTCATTCAAACTTGAAGGAGCTAACAATTGATGGTTATAGGGGTGAAATATTCCCCGATTGGTTAGGCCTTTCTTCCTACTCCAATATAACCAAGTTGAAAATTTGTTTTTGTAAGAATTGTCGTGAGCTTCCTTCGCTTGGACAGTTACCCTCTCTACAGCATCTGCAGATTTATAAACTGTTTGGGTTGGAGAGAATTGGTGAAGAGTTTTACAAGAGCGGTGAATCATGCCATGAGGTGACACCCTTCAGATCTCTTGAATACCTGGAATTTGATGGAATGAAATGTTTACAAGAGTGGCATATTCCTGATGAGTTTGATGGATTTCCTAAGCTTACAACCCTTGTAATAAGAAGTTGTCCGGTGTTAAAGGGAGATCTGCCAGCTCACCTTCCGGCTCTGGAGCAACTTGCCATTTGGGATTGCGAAGAGCTTACGTGTTCATTCCCGAGATCTCCCAAGCTTCACCAATTAGAGGTAACGACTTCTGTTCATGGGCTTAATCAGAGTTCGCCGCACGAGGTAGTGATTTCTTATACCCAGCTGGCGAAGTCCGTATTGGAGTGCCTGCCCCACATCCAATCGCCTTATCTCCAAGATTTGAAAATCAATAATTGTCGATCAGCAATATCAATTTCAAATGATCATTTGCCTGACTCATTACAATATCTGCAAATCTCCCGTTGTTCAAAATTAACAATCTCAGAGCCACTGCAACACGAGTCCCTAGCGGAGATACATCTGGACTTCTGTCGTTCACTGAGGCTGTTGCCATTGGAAGCTCTCTCAAATCTCAAGACACTCTCAATCGAACGCTGCTACGATTTAGTATCCTTGCCGCCACTACGCTTTGCTGCTCCCAACCTAAAGAAACTGACAATAGCGGTTTGCCCAGAAATTGATTGTTTTGGAGAGGAGTGCCTCCCGCCGAGCTTGACAACTCTTGAGATCCGTAAATGCCAGAAAGTAGAGAGGTGGATAACATCCAATGGTTTGCACACTGAAGGCCTTACCCATCTTATCCTTAAAGAATGGAATGAAGTTAAGTCGTTCCCAACAGAGGACGTTAGACTGCAAGGGCCTTCACCATCTCACCTCCCTCCAAGAATTAACAATTCGAGACTGTCCCGAGCTAAAGCATATGAAAACAGAAGAGCTGCCCGCCTCTCTATCAATAATCCTCATCGACCCATTACGTTCTTTGAGGCTTGA 3426 0.411 MAAKLYGGAYLSSFVDAVLDNLSKILEDDDSVLKGNYTALELLERLEKCLFEVGPFLDDAELKQFTNKRVKVWLADLQDALYLADDLLDELSTKSATATASQRDPAGISSYCISVVDSILEDSREMEDIARKLENIVARKGYLPLEKTAMVDISSWRTPSTSLVVSSDIFGRDKDKEEIIKLLLADTCHAQSPFTVIPIWGMGGIGKTTLAQLVYSDDKVVEYFDTRVWVCVAENSDPIHVTRTIIGAIDPSPCSMDSFDVLQTKLKGKLIEKTFLVVLDDVWHSGRVTWEKFLEPFQHGNNGSRILLTTRIEKVASTFAATSQHYQLDLLSDEDCWSVFLKHSSISTNLEQYATLEPIGRNILEKCKGLPLAVKTLGSLLRNKYDAGHWKKILESEIWELPEDESEIVPALRVSYHYLPSYLKRCFIYCSLYPEDYQFDKDELILQWMAEDLLPPMENDTLENIGSECFDELVARSFFQSSSASTGLFVMHDLMHDLATFFAGRFFFREFGNQRMVDSKTRHLSCDRDPISRFPEGYDGVIHMRTFLCFDVKSTEIEVKSRCLRLLAFQKCEILSLPDSIGELIHLRYLNLSSTPIVTLPESLCKLYNLQTLKLRDCDKLEMLPRVQDLVNLRHLDIRGTSCLKEMPKGMSKLKHLNLLGFYVVGEHEENGIGELGPIDVHGSFRISKLENVNNSSQASKANMGSKKHINVLELKWRYYADTMSVETERDILKELQPHSNLKELTIDGYRGEIFPDWLGLSSYSNITKLKICFCKNCRELPSLGQLPSLQHLQIYKLFGLERIGEEFYKSGESCHEVTPFRSLEYLEFDGMKCLQEWHIPDEFDGFPKLTTLVIRSCPVLKGDLPAHLPALEQLAIWDCEELTCSFPRSPKLHQLEVTTSVHGLNQSSPHEVVISYTQLAKSVLECLPHIQSPYLQDLKINNCRSAISISNDHLPDSLQYLQISRCSKLTISEPLQHESLAEIHLDFCRSLRLLPLEALSNLKTLSIERCYDLVSLPPLRFAAPNLKKLTIAVCPEIDCFGEECLPPSLTTLEIRKCQKVERWITSNGLHTEGLTHLILKEWNEVKSFPTEDVRLQGPSPSHLPPRINNSRLSRAKAYENRRAARLSINNPHRPITFFEA 1141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc90990g00005 1141 Gene3D Ribonuclease Inhibitor 549 909 IPR032675 -
Stsc90990g00005 1141 Pfam Rx N-terminal domain 14 99 IPR041118 -
Stsc90990g00005 1141 PRINTS Disease resistance protein signature 998 1014 - -
Stsc90990g00005 1141 PRINTS Disease resistance protein signature 269 283 - -
Stsc90990g00005 1141 PRINTS Disease resistance protein signature 367 381 - -
Stsc90990g00005 1141 PRINTS Disease resistance protein signature 196 211 - -
Stsc90990g00005 1141 Pfam NB-ARC domain 173 396 IPR002182 GO:0043531
Stsc90990g00005 1141 FunFam Probable disease resistance protein At1g63360 416 501 - -
Stsc90990g00005 1141 Gene3D - 15 130 - -
Stsc90990g00005 1141 PANTHER DISEASE RESISTANCE PROTEIN RP 59 882 IPR044974 GO:0006952
Stsc90990g00005 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 430 IPR027417 -
Stsc90990g00005 1141 Gene3D - 330 414 IPR042197 -
Stsc90990g00005 1141 SUPERFAMILY RNI-like 821 1062 - -
Stsc90990g00005 1141 Gene3D - 415 500 IPR036388 -
Stsc90990g00005 1141 SUPERFAMILY L domain-like 490 897 - -
Stsc90990g00005 1141 Gene3D - 156 325 IPR027417 -
Stsc90990g00005 1141 Gene3D Ribonuclease Inhibitor 911 1098 IPR032675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc90990g00005 Stsc-Chr90990 28406 31885 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90990g00005 181 665 WRKY Transcription Factor Family AT5G45050 22.182 2.17e-12 69.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90990g00005 - - ahf:112709990 1295.8