Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90977g00005 ATGATTTCCACATCTCAGAAGAAGAGCCTCCACTCTCTCATGGCTGCTAACCTCAGCAACCTCACCATACCTCCTTCTTCTTCTTCTTCTCTGAACAACGAACATGATGAATTTGACTTTTCCCATGTATTCGGCCACCACGACGAAACCAACACCGCCCCAGCCTCAGCTGCAATGAGCCCGCACGTGATCCACAGTAGGTCCCACTCCTTCGTGGGTCCCTCCCCTCGCGTGGCCCCACCCTCCAACCCCGTTCTCTCCTTCGTCAACGAACTCTCTTCCCAGAGCGAGGGAGAAGAATCCGAACAGCTGCCTCTCAATGAAATCCACAATAGCGACCAAGTTGCGGTGCCGGATGAAGAGAAGGTGGGTCCTAGAATTGGGCCTGCGGATTTCCAGATTTTGAGGGTTGTTGGTCAGGGTTCTTTTGGGAAGGTGTTTCTTGTACGGAAGAAGAAGAAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTGCCGTGATGATGTGTTTGCGATGAAGGTTATGAGGAAGGAAACCATCATCAAGAAGAACCACGTGGATTACATGAAAGCTGAGAGAGATATTCTTACTAAAGTTGTTCATCCTTTCATTGTTCAGCTTCGCTATTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTGTATCGACAGGGCATTTTCAGGTATAATGTTCTTAATTTCTTAAAAAACGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATAGTGATGGGCATGTGATGCTAACGGATTTCGGATTGTCTAAAGAGATTGATGAATCGGGCCGATCCAACTCTCTGTGTGGGACCGTGGAATACATGGCTCCGGAAATCATTCTGGGTGAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGAGAAAGTTAAACTTCCCCCAACCGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAGTGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAAAACTCGAACCTAAGTTCAAACCAGATGTTTCCAGTAAAGAGTGTACAGCTAACTTTGACCAATGCTGGACGGCAATGCCTCCCCACGACTCACCAGCTTCCACTCCTACGGCCGGTGACCATTTCCATGGCTACACTTATGTTGCACCAAACCCTTGGCTTTCCTCCGAAGACTGA 1404 0.4594 MISTSQKKSLHSLMAANLSNLTIPPSSSSSLNNEHDEFDFSHVFGHHDETNTAPASAAMSPHVIHSRSHSFVGPSPRVAPPSNPVLSFVNELSSQSEGEESEQLPLNEIHNSDQVAVPDEEKVGPRIGPADFQILRVVGQGSFGKVFLVRKKKKEEEEEEEEEEEEEEEEEEEECRDDVFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFRYNVLNFLKNGIVHRDLKPENILMDSDGHVMLTDFGLSKEIDESGRSNSLCGTVEYMAPEIILGEGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKEKVKLPPTVSTEAHSLLKGLLQKDPSTRLGSGPNGDEQIKSHKWFRPINWKKLEARKLEPKFKPDVSSKECTANFDQCWTAMPPHDSPASTPTAGDHFHGYTYVAPNPWLSSED 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90977g00005 467 SMART pkinase_C_6 399 458 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc90977g00005 467 ProSiteProfiles Protein kinase domain profile. 132 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90977g00005 467 MobiDBLite consensus disorder prediction 154 176 - -
Stsc90977g00005 467 SMART serkin_6 132 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90977g00005 467 PANTHER RIBOSOMAL PROTEIN S6 KINASE 47 460 - -
Stsc90977g00005 467 ProSiteProfiles AGC-kinase C-terminal domain profile. 399 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc90977g00005 467 FunFam Non-specific serine/threonine protein kinase 247 418 - -
Stsc90977g00005 467 Pfam Protein kinase domain 177 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc90977g00005 467 Coils Coil 145 178 - -
Stsc90977g00005 467 Gene3D Phosphorylase Kinase; domain 1 130 441 - -
Stsc90977g00005 467 Pfam Protein kinase C terminal domain 419 456 IPR017892 GO:0004674|GO:0005524|GO:0006468
Stsc90977g00005 467 MobiDBLite consensus disorder prediction 158 176 - -
Stsc90977g00005 467 Gene3D Transferase(Phosphotransferase) domain 1 234 417 - -
Stsc90977g00005 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Stsc90977g00005 467 SUPERFAMILY Protein kinase-like (PK-like) 125 444 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90977g00005 Stsc-Chr90977 23568 27437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90977g00005 20 459 AGC Kinase Gene Family AT3G08720 52.814 1.70e-161 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Stsc90977g00005 Pkinase 1.5e-55 CL0016