Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90969g00007 ATGATAATCTTCAACCCAATTTTAATTCTCTTTTCTACACTCCTAATACTCTTCCTACTTAACTACACAACTAAATCCAAGAAGCTCAACCTTCCTCCAGGTCCCCCTGCTTGGCCTATTGTTGGTAACCTCTTCCAAGTTGCACGCTCTGGAAAGCCCTTCTTCTCTTTCGTGAACGATGTGAGGCAAAAATATGGCCCAATTTTCACCCTCAAGATGGGTACAAGAACCATGATCTTCCTCAGCGACCCCAAACTAATCCACGAGGCTTTGATCGAAAACGGTGCACTCTACGCTAGCAGGCCACCTGAGACTCCAACAAGGAGTGTCTTCAGCGTTAACAAGTTCACCGTTAACGCCGCCACGTACGGCCCCGTATGGCGGTCCCTGAGGAAGAACATGGTTCACAACATGCTCAGCTCCACCAGGCTGAAGGAGTTTCGTTCTGTTAGAGAGAAAGCCATGAACAAACTCATCGACAGGCTCCGAGCCGAAGCAGAGGCTAACAACGGCATCGTTTGGGTTCTGAAAGATGCAAGATTCGCCGTCTTCTGCATACTTCTCACCATGTGTTTCGGCCTCGAGATGGACGAAGAAACCGTTGAGAAAATGGATCAGATGATGAAGCTTGTCCTCATTACAGTGGACCCGAAGATCTACGACTATCTCCCGATCTTGAAGCCTTTCTACTGGAAGCAGAGGAAGAGAGCCTTGGAGATTCGTAAGGAGCAGATTGAGTTCATGGTTCCCTTCATTGAGCAGAGGAAGAGAGCGATTCAAACCCCTGGCTCGGATCTCTCCGCCACTTCGTTTTCCTACCTGGACACGCTCTTCGACCTCAAGATCGAAGGGCGAAAATCTTCGCCGTCAATGGATGAATTGGTTACCCTCTGCTCCGAGTTTCTCAACGGCGGTACTGACACCACGGCTACCGCCGTGGAGTGGGGGATTGCAGAGTTAATTGAGAACCCGCACGTGCAAAAGAAGCTGTTTGAGGAGATCAAAGAAACGGTTGGAGAAGAGAGAGAAGTGAGTGAAAAGGACGTGGAGAAGATGCCGTACTTGCAAGCAGTGGTGAAGGAGCTCTTAAGGAAGCATCCTCCAACATACTTTACACTCACTCATGCAGTAACGGAACCAACTACCATAGCTGGGTTTGACATACCGACTGATGTGAATGTGGAAATCTTTATTAAGCCGTTTGGAACTGACCCGAAAGTTTGGAGTAATCCGGAGAAATTCGAACCCGAGAGGTTCATGGAAGGAGGGATGGAGAAGGACGTTGACATTACCGGAGTGACCGGGACGATGAAGATGATGCCGTTTGGGGTGGGGAGAAGGATATGCCCTGGATTGGGTATGGCGACGGTTCATGTTCACCTGATGCTGGCCAGGATGGTGCAAGAATTTGAGTGGAGTGCATATCCCGAAGGTAAGCCTTTGGATTTCAGTGGCAAGTTGGTGTTCACTGTGGTTATGAAGGAATCTCTCAGAGCAACCATTAAGCCAAGATCATCATCATTAGCATCAGCAGAAAAATGA 1542 0.487 MIIFNPILILFSTLLILFLLNYTTKSKKLNLPPGPPAWPIVGNLFQVARSGKPFFSFVNDVRQKYGPIFTLKMGTRTMIFLSDPKLIHEALIENGALYASRPPETPTRSVFSVNKFTVNAATYGPVWRSLRKNMVHNMLSSTRLKEFRSVREKAMNKLIDRLRAEAEANNGIVWVLKDARFAVFCILLTMCFGLEMDEETVEKMDQMMKLVLITVDPKIYDYLPILKPFYWKQRKRALEIRKEQIEFMVPFIEQRKRAIQTPGSDLSATSFSYLDTLFDLKIEGRKSSPSMDELVTLCSEFLNGGTDTTATAVEWGIAELIENPHVQKKLFEEIKETVGEEREVSEKDVEKMPYLQAVVKELLRKHPPTYFTLTHAVTEPTTIAGFDIPTDVNVEIFIKPFGTDPKVWSNPEKFEPERFMEGGMEKDVDITGVTGTMKMMPFGVGRRICPGLGMATVHVHLMLARMVQEFEWSAYPEGKPLDFSGKLVFTVVMKESLRATIKPRSSSLASAEK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90969g00007 513 Gene3D Cytochrome P450 24 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 CDD CYP77_89 64 498 - -
Stsc90969g00007 513 Pfam Cytochrome P450 32 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 FunFam Cytochrome P450 family protein 25 506 - -
Stsc90969g00007 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 491 - -
Stsc90969g00007 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc90969g00007 513 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90969g00007 513 SUPERFAMILY Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90969g00007 Stsc-Chr90969 39425 40966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90969g00007 4 504 Cytochrome P450 AT5G04630 62.675 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90969g00007 K21995 - qsa:O6P43_004935 777.319