Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90963g00008 ATGGGTCATCTTTCTTCAATGTTGAATGGTTTGGCAAAATCACTGGCAATTAAGAAAGGGAGGAATACAGAAAGAAACAGCAGCGGTGGTGGAAGAGAAGCGGCGGAAGCAATGGCGAAGGAAGCAAAAAAGAATGAGTTGTTGTTATGCAGCTCAGGCAGCGTCAATGTTGATGGATCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGCAACAAAGGAGTCAATCAAGATTGCTGCGTAGTCTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGTGGGATCTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCCAAAAGGGTGAGAGAATCAATGGCACCATGTTTGCTATGCAATTGGCAAGAGACTCTTTCCCAAACTTCACTTGATCTTGACCCAGATTCTGTAGATGTTGATGTTGAAGCAGAGAAGATGCAAAACTGGTTTAAAATATGGAAGCATTCCTACTTGAAAACCTGTGCCGCCATTGATCGAGAACTCGAACAGAATCGCAAGATCGATTCGTTTTTCAGCGGAACTACTGCCCTCTCTATTGTTAGACAGGGTGAACAAATTGTAATTGCAAATGTTGGTGACTCACGTGCTGTATTAGCTACAACCTCACATGATGGAAGTTTGGTACCCATTCAGCTCACAGTAGATTTCAAGCCAAATTTACCTCAGGAGGCAGAGAGAATTCTAGAGCGCCAAGGCCGAGTGTTCTGCTTAGAAGATGAGCCGGGCGTGCACCGGGTGTGGCTGCCGGACGAAGAGTCGCCGGGGCTGGCCATGTCTAGGGCACTTGGTGACTACTGCGTCAAAGAGTATGGCCTAATATCAGTGCCTGAGGTAACCCAATGGAACATAACAACCAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATATCAAATGAAGAAGCAGTGGAGATTGTATCTTCAGCAGCAGAGAGAGGAAAGTCAGCAAGGCGTTTGGTGGAATGTGCAATGCATTCATGGAAACGCAAGAGGAGAGGCATTGCCATGGATGATATCTCTGCCATTTGTCTATTCTTTCACTCTCCTTCTAACTTTCTTCATAACCAACAACTTCCCACCCTTAACTAA 1131 0.4598 MGHLSSMLNGLAKSLAIKKGRNTERNSSGGGREAAEAMAKEAKKNELLLCSSGSVNVDGSNNFASVFSKRGNKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMAPCLLCNWQETLSQTSLDLDPDSVDVDVEAEKMQNWFKIWKHSYLKTCAAIDRELEQNRKIDSFFSGTTALSIVRQGEQIVIANVGDSRAVLATTSHDGSLVPIQLTVDFKPNLPQEAERILERQGRVFCLEDEPGVHRVWLPDEESPGLAMSRALGDYCVKEYGLISVPEVTQWNITTRDQFVVLATDGVWDVISNEEAVEIVSSAAERGKSARRLVECAMHSWKRKRRGIAMDDISAICLFFHSPSNFLHNQQLPTLN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90963g00008 376 ProSiteProfiles PPM-type phosphatase domain profile. 63 360 IPR001932 -
Stsc90963g00008 376 CDD PP2Cc 62 360 IPR001932 -
Stsc90963g00008 376 Gene3D - 54 362 IPR036457 -
Stsc90963g00008 376 FunFam Probable protein phosphatase 2C 34 54 362 - -
Stsc90963g00008 376 SUPERFAMILY PP2C-like 61 362 IPR036457 -
Stsc90963g00008 376 SMART PP2C_4 54 358 IPR001932 -
Stsc90963g00008 376 PANTHER PROTEIN PHOSPHATASE 41 358 IPR015655 GO:0004722|GO:0006470
Stsc90963g00008 376 Pfam Protein phosphatase 2C 87 333 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90963g00008 Stsc-Chr90963 35534 38727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90963g00008 1 361 PP2C-type Phosphatase Gene Family AT3G05640 69.252 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90963g00008 - - gmx:100801309 583.948