Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90963g00002 ATGAATGATCGCAGTAGTCGTTCTCATAGCTGCCTCACAGTTCATGTTCATGGAAAGAACGTTACATCGGGAAATACTATTCGTGGTTCTATTCATTTAGTTGACCTAGCCGGAAGCGAAAGGGTTGACAAATCTGAGGTCACAGGAGACAGACTGAAGGAGGCTCAACATATCAACAAGTCACTTGCTGCTTTGGGAGATGTTATATCTTCTCTTGCCCAAAAGCAATCACATGTTCCTTACAGAAACAGCAAACTTACTCAGCTACTTCAAGATTCTCTAGGAGGGCAAGCAAAAACACTAATGTTCGTTCATATTGCTCCGGAGCAAGACGCTGTTGTAGAATCAATTAGTACACTCAAGTTCGCCGAAAGGGTATCCACTATTGAACTTGGTGCTGCCAAAGTTAACAAAGATAGTTCAGAGGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGACAGCCTTAGCACAAAAGGATGAAGAATCAGAACAGTCTCAGTTTGCTACTCCACGTGGTTCTAAGTCCGGTCGCAAGCTACCAAGAAATGATTCAGTTAGTAGCCTGGAGGATCAGAAAATGGAATCATCACTGTCGAAAAGGCGAAGCCTTGATTACCAAGACATGTGGACAAATGGTTCATCACCATCAGACCTGAGCAGGAATGAGAGCTATGCTAGCATTTTACCTTCCCCACCGATGTTAAGTCCCAGTATATATGACGCCGAAGATACTGAGTTTGCACCTGGTGCAAGTCCAGATCAGTTTGCATCAACAGCAGCAAAAACAACAGGTACCTCCAATGGATCAGGACCTGATAAATTAAAGAGAACACCTTCAAAGAGACTAGTTGGGAGCAGAGAAACCACCACCAGACCAACATTGAGTCCTTCGCCATCAAGGAAACCATCTACCCTGCCTAAAAAGGCAGGTACTGTTGATGCCAAGAGAAGAACTGGCAAGTGA 969 0.4396 MNDRSSRSHSCLTVHVHGKNVTSGNTIRGSIHLVDLAGSERVDKSEVTGDRLKEAQHINKSLAALGDVISSLAQKQSHVPYRNSKLTQLLQDSLGGQAKTLMFVHIAPEQDAVVESISTLKFAERVSTIELGAAKVNKDSSEVKELKEQIASLKTALAQKDEESEQSQFATPRGSKSGRKLPRNDSVSSLEDQKMESSLSKRRSLDYQDMWTNGSSPSDLSRNESYASILPSPPMLSPSIYDAEDTEFAPGASPDQFASTAAKTTGTSNGSGPDKLKRTPSKRLVGSRETTTRPTLSPSPSRKPSTLPKKAGTVDAKRRTGK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90963g00002 322 PRINTS Kinesin heavy chain signature 30 48 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90963g00002 322 PRINTS Kinesin heavy chain signature 79 100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90963g00002 322 Gene3D Kinesin motor domain 1 171 IPR036961 -
Stsc90963g00002 322 MobiDBLite consensus disorder prediction 257 275 - -
Stsc90963g00002 322 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 280 IPR027640 GO:0003777|GO:0007018
Stsc90963g00002 322 Coils Coil 136 163 - -
Stsc90963g00002 322 MobiDBLite consensus disorder prediction 185 203 - -
Stsc90963g00002 322 Pfam Kinesin motor domain 1 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90963g00002 322 SMART kinesin_4 1 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90963g00002 322 MobiDBLite consensus disorder prediction 204 232 - -
Stsc90963g00002 322 MobiDBLite consensus disorder prediction 285 306 - -
Stsc90963g00002 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 165 IPR027417 -
Stsc90963g00002 322 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 65 148 - -
Stsc90963g00002 322 MobiDBLite consensus disorder prediction 157 322 - -
Stsc90963g00002 322 ProSitePatterns Kinesin motor domain signature. 29 40 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc90963g00002 322 ProSiteProfiles Kinesin motor domain profile. 1 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90963g00002 Stsc-Chr90963 10387 12417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90963g00002 1 165 Calmodulin-binding Proteins AT5G65930 47.879 1.26e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90963g00002 K10406 - twl:120008567 298.13