Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90962g00005 ATGGCGTCAAAGTCTCCGCCTCCGCCCCCGCCCCCTCTTCCTCCGTCTTTCGCCTCTTCTTCTAGATCGGAGCTTCCCGTCGATCTATCGGGAAACAAAGCTAATGAAGTGAGTCCGACAGTTAGAGATGTGTCAATGGTTATTGATTCTTTAAAGAAACAAGTTGCCGCAGAACGAATTGTTTCCGTTAAGAAAAGAATGGAAGAAAATAGGCATAAGCTGGTTGGTGTCACAAACAACCTCGGCAGATTGTCAATGGAGAGGATGGCAGGTAGCGAAACTGATGCACATAGAAGTCTGGACCTGTTGACAAAGCGACAAAAGGATGCAACTGATATGCACAATGGTATTCATGCAAGTAACGATGATGGGGAGAGCAATAGTTATCCCGAAGATAGTCATGGTTCTACGGCAGTTCTTTTAGGATCTAATGTTGCTGTGAAGAATGCTGTTCGTCCCATCAAGTTACCAGAAATAAAAAGATTACCTCCTTACACCACTTGGATATTTCTGGACAGAAATCAAAGAATGACAGAAGATCAGTCGGTTGTAGGTCGTAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAGGAGGAGATAATAGACGATGAAGAGGAAAAGAGAGAGTTTGTAGAATCAGAAGATTATATACTTCGCATGACCGTTAGAGAATTGGGTTTATCTGATACTGTTCTGGACTCGTTGGCTCAATGCTTTTCTAGAAATACTAGTGAAATCAAGGCCAGATATGAAACTCTTAGTAAGGAAGACAATGCTGCTGAGGGTTCCAAGAATGGGGATACTAAAGATATTTCTCAAAGTGAAAATTCTTTTTTGGAAAAGGATCTTGAAGCAGCTCTTGACTCCTTTGACAATCTATTTTGCCGACGCTGTCTTGTTTTCGATTGCCGATTACATGGATGTTCCCAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTCTGTGGAATGCTCCTGATACTGAAAATGCACCATGTGGGCCAAATTGTTTCAGATCGGTACTTAAATCAGGAAGGTTTTCCAAAGCTACCTCTTCTGCCCAGGCTGATGTTGAAGAGAAATGCTCAGGTGGTTCTTCATCTAGGAAGAAGTCTTCTGCTAAGAGGCGCACAAAATGCAGCCAAAGTGAAAGTGCCTCATCTAATGCAAAGAACATATCTGAGAGTAGTGACTCTGAGAATGGTCCTGGAAAGGATGCTTTTTCAGCTTCCCAGGCAGCACCACCTAAAACTAAACCTGTGGGGAGAGGTGGAGTTGGTAAGAGGAACAGCAAGCGGGTAGCAGAACGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGCGGTTTCTGATTCTGATTCCATTGTTGAAGGTGATCATTCATCAAATGACATGGTTACTGAACCACCTGTCTTGAGCAGTGAAGATAATGCAAGGAAAGAAGAGTTTGTGGAGGAGAACATTTGCAAACAAGAATCCACTGACAATAAATCTTGGAGAGCTCTTGAAAAAGGACTCCTAGAGAAAGGAATGGAGATTTTTGGGAGAAACAGCTGCTTAATAGCCAGGAATCTTCTAAATGGACTAAAGACATGTTGGGAGGTTTTCCAATACATAAATTGGGATGAAGGAAAGATGTCAGGTTCTGCTGGGGATGGTGCAAATTCTCTTGTGGAAGGCTATTCAAAGGGTAATAATGAAGTGAGACGAAGGTCAAGATTTTTACGTAGAAGGGGTAGAGTTCGTCGCTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATAAGGAAAAGGATTACAGAAAGAAAGGATCAACCCTGCAGGCAGTACAATCCATGCGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCATGTCTTCAAAATGGAACCTGCTGTGAGAAATACTGTGGATGCCCGAAGAGTTGCAAGAATCGATTTCGTGGCTGTCACTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCTTGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGTAGGAATTGTTGGGTCAGCTGTGGCGATGGTTCTCTTGGGATTCCTAGCCAAAGAGGTGATAATTATGAATGTAGGAACATGAAGCTTCTCCTCAAACAGCAACAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACCGGGAAGCAGACAAGCGAGGCAAGATATATGACCGAGAAAATTCATCTTTTCTCTTTAATTTAAATGATCAGTTTGTTCTTGATGCTTATCGGAAAGGTGACAAATTGAAGTTTGCAAACCATGCTCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGACCACAGAGTAGGTATATTTGCCAAGGAACGGATAATGGCTGGGGAGGAACTGTTTTACGATTATCGATATGAACCTGATAGAGCTCCTGCCTGGGCTAGGAAACCAGAGGCATCTGGATCTAAAAAAGAGGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCGTAA 2610 0.4303 MASKSPPPPPPPLPPSFASSSRSELPVDLSGNKANEVSPTVRDVSMVIDSLKKQVAAERIVSVKKRMEENRHKLVGVTNNLGRLSMERMAGSETDAHRSLDLLTKRQKDATDMHNGIHASNDDGESNSYPEDSHGSTAVLLGSNVAVKNAVRPIKLPEIKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDDEEEKREFVESEDYILRMTVRELGLSDTVLDSLAQCFSRNTSEIKARYETLSKEDNAAEGSKNGDTKDISQSENSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWNAPDTENAPCGPNCFRSVLKSGRFSKATSSAQADVEEKCSGGSSSRKKSSAKRRTKCSQSESASSNAKNISESSDSENGPGKDAFSASQAAPPKTKPVGRGGVGKRNSKRVAERVLVCMQKRQKKTAVSDSDSIVEGDHSSNDMVTEPPVLSSEDNARKEEFVEENICKQESTDNKSWRALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWEVFQYINWDEGKMSGSAGDGANSLVEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHAPDPNCYAKVIMVAGDHRVGIFAKERIMAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 463 479 - -
Stsc90962g00005 869 CDD SET_EZH 720 836 - -
Stsc90962g00005 869 FunFam Putative histone-lysine N-methyltransferase EZH2 620 837 - -
Stsc90962g00005 869 Coils Coil 202 222 - -
Stsc90962g00005 869 Pfam SET domain 731 834 IPR001214 GO:0005515
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 844 869 - -
Stsc90962g00005 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 39 867 IPR045318 GO:0006338|GO:0042054
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 113 135 - -
Stsc90962g00005 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 869 IPR025778 GO:0031519
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 386 413 - -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 361 439 - -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 452 485 - -
Stsc90962g00005 869 SMART CXC_2 654 691 IPR033467 -
Stsc90962g00005 869 ProSiteProfiles CXC domain profile. 606 705 IPR026489 -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 844 862 - -
Stsc90962g00005 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 1 17 - -
Stsc90962g00005 869 Pfam CXC domain 658 689 IPR041355 -
Stsc90962g00005 869 SUPERFAMILY SET domain 594 840 IPR046341 -
Stsc90962g00005 869 Gene3D SET domain 620 837 IPR046341 -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 113 129 - -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 1 36 - -
Stsc90962g00005 869 MobiDBLite consensus disorder prediction 18 36 - -
Stsc90962g00005 869 SMART set_7 720 841 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90962g00005 Stsc-Chr90962 27052 33174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90962g00005 709 838 C2H2 Transcription Factor Family AT2G23740 26.531 1.60e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc90962g00005 SET 6.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90962g00005 - K11430 gmx:100809840 1493.02