Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90960g00007 ATGTCATCATCATCACCATCATCAACATCATCATCATCAACATCTTCTCCACACGACTCTTCTTCTGCTGTTCCTCTTCCTCCTCCTTCAAATGCTAATGCTGCTTCTGCTCCTCAGGACTCTAATGCTCCCTCCTCCTCTTCTTTCCGGAGGTCCACCCGCGAATTTGGAGAGTCTTCTTCTTCTCGCCACCAACGGCTACGTACTATGAATGAGGCTTTGCCTGAGGCCCTTCTTGAAATCTTGGCCGCTCAAGTTGCCACTGATGCTTCCAACCACCATGGTCGCTTGGCTGCTGCTCCTGCAGTTGTTCGTTTGTTTCAGGTTTGTTCTACTTGGCGAGGGGTGTCAAATTTGGATCACCTGTGGCATGGCCTCACCATGCTCATCTGGCGCCGGGCCTACCTACTACGCGACACGTGGCGAGAGGAGTACATCTACTGGCATCGGACGGCTAGGAACTTTGCATTAGGAGCACACTCCTACCGTGTCCCACACTTCGACCCTTCTATACCTCCCAACGGCGCCGGCGACTACCGCCAGACCCTACTATGCCGCTGCCTTGCTCTCTCTGACCGCCACCTCGCCTGCGGCTTCGCCGACGGCACCGTCCGCCTCTTCGACGTCGAGAATCTCGCCCACGTCAGCACATTCCGGACGAACCACGGGCCGCGGTTCGGCCCGTTCTCCCGGTCCGTCTCCGGCATAATCCTCTCGGACGACACGCTCACCTTCGCTAGAATCGACGGGGATGTTTTTGTGGCGGCAATCAACATGGCCAACGAGCCCCCGCAACAGGTGGTTGCAGGTGACGTGGTAAACAATGGTGTGTTAGTTGAGTTCGCGGGTAATAGTCAATGGTGGGTGGGCCTATACGCAGGGCTTCCGGGCCGGGCTTTCCAGATATGGGATGCACTAAACCAGCAACTGATATCAGTGGGCGGGACGTTAACAGACCCGGAAACGGTTATGGGATGGCACATGCTAACAGAATTAGTTGAGCCAGTTGGGCGCGTGAGAGTCACGGAGCAAGAGTATGTCGTGGCGTGCACGAGCTCAAGGTTAGTTTGTTTTAGTTTGCGGAACCCGGAGGAGGTTATACGTGACGTGGGTTCTGTTACGGGGTTTGTTGTGAGCAGTTTGGACGCGCGTCACGATGCGTTTGTGGTTGTTGAGAGGAACGGCGTTGGTACGGTGCGACGCGCGAGCACGTTTGAGCGGTTGAGTAGGTTTCGGTTGAGGGTTCCGTGGATTAGGGGTTTGTTAGCGTGCATCAACATGGGTTATGTGTTAACTTACTCCGGGGTGAATGGGGTTCTAAGGGTTTGGAACATTGAGCAAGTTGTTGGGGTTTTGTGTTGCAACTTGCCCGTTAGGGCTGGAGACGGTAATTCCATCGTGGCTAATGAAAGACACGTGGCCATTTCTTGGAATGACACTTTCATACACTTATTGGATTTTGGTGTATAG 1470 0.5408 MSSSSPSSTSSSSTSSPHDSSSAVPLPPPSNANAASAPQDSNAPSSSSFRRSTREFGESSSSRHQRLRTMNEALPEALLEILAAQVATDASNHHGRLAAAPAVVRLFQVCSTWRGVSNLDHLWHGLTMLIWRRAYLLRDTWREEYIYWHRTARNFALGAHSYRVPHFDPSIPPNGAGDYRQTLLCRCLALSDRHLACGFADGTVRLFDVENLAHVSTFRTNHGPRFGPFSRSVSGIILSDDTLTFARIDGDVFVAAINMANEPPQQVVAGDVVNNGVLVEFAGNSQWWVGLYAGLPGRAFQIWDALNQQLISVGGTLTDPETVMGWHMLTELVEPVGRVRVTEQEYVVACTSSRLVCFSLRNPEEVIRDVGSVTGFVVSSLDARHDAFVVVERNGVGTVRRASTFERLSRFRLRVPWIRGLLACINMGYVLTYSGVNGVLRVWNIEQVVGVLCCNLPVRAGDGNSIVANERHVAISWNDTFIHLLDFGV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90960g00007 489 MobiDBLite consensus disorder prediction 1 66 - -
Stsc90960g00007 489 MobiDBLite consensus disorder prediction 1 55 - -
Stsc90960g00007 489 PANTHER WD40 REPEAT PROTEIN 12, 37 25 470 - -
Stsc90960g00007 489 SUPERFAMILY WD40 repeat-like 184 484 IPR036322 GO:0005515
Stsc90960g00007 489 Gene3D - 180 489 IPR015943 GO:0005515
Stsc90960g00007 489 SUPERFAMILY F-box domain 103 150 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90960g00007 Stsc-Chr90960 35631 40512 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Stsc90960g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90960g00007 - - aip:107606416 778.474