Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90959g00001 ATGGATCCCAAGGGCTCAAAGCAGCCACAGGAGCCACCACCACCACCACAACAACCAAACAACAACAACTTCCTCACGGCCACCGCCATGGGAGAGAACAAGCCACCATCCGATGCTAAAGATTTCCAGATTGTAGCATCGGAGAAAGAAGAGAACAACAACAGCAGCAAGAAACAGCAGGGTTCGCAGCAGTTAGCGCCAAAGAGAAGCTCGAACAAAGACAGACACACGAAGGTTGAAGGAAGAGGTAGAAGGATAAGGATGCCGGCTCTTTGCGCCGCAAGGATCTTCCAGTTGACCAGAGAATTAGGCCACAAATCTGACGGCGAAACAATCCAGTGGCTCCTCCAACAAGCCGAGCCTTCAATTATCGCCGCCACCGGCACCGGGACAATCCCAGCCTCCGCCCTCGCCGCAGCCGGAAACTCCGTCTCCTCGCACCAAGTACCACCACCATCGCTCTCTGCAGGGTTACATCAAAAGATTGATGAATTAGGAGGGTCAAGTAGTAGAACCAGTTGGGCAACAATGGTTGGAGTTGGGAATTTAGTTGGAAGACCTCATCATCATCACCACCACCATCATCAAGTGGCCGCCACGGCGGGGCTATGGCCACATCATCATATACCTGGATTTGCTGGACAATCAAGTGCTGCTGCTTCTGAAGGGTCATCGAATTACCTTCAAAAGATTGGGTTTCCTGGGTTTGACTTTTCGGTTCCCGGTGGCGGCGGTGGTGGTGGTGGCATGGGTGCTATGAGCTTTACTTCAATATTGGGTGGTGCACAACAACAGATGCCGGGTTTAGAGCTTGGTTTGTCACAAGATGGACATATTGGGGTCATAAATCCACAGGCTTTGACTCAGATTTACCAGCAGATGGGTCAGCCTAGAGTGCACCAGGACCATCAAGATCACCAACACCAGCACCATCAGCAGCAGCAGCAGCAGCAGACTCCTTCTTCTAAGGATGATTCTCAAGGCTCTGGACAGTAG 996 0.5181 MDPKGSKQPQEPPPPPQQPNNNNFLTATAMGENKPPSDAKDFQIVASEKEENNNSSKKQQGSQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSSHQVPPPSLSAGLHQKIDELGGSSSRTSWATMVGVGNLVGRPHHHHHHHHQVAATAGLWPHHHIPGFAGQSSAAASEGSSNYLQKIGFPGFDFSVPGGGGGGGGMGAMSFTSILGGAQQQMPGLELGLSQDGHIGVINPQALTQIYQQMGQPRVHQDHQDHQHQHHQQQQQQQTPSSKDDSQGSGQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90959g00001 331 MobiDBLite consensus disorder prediction 69 85 - -
Stsc90959g00001 331 ProSiteProfiles TCP domain profile. 72 126 IPR017887 -
Stsc90959g00001 331 Pfam TCP family transcription factor 71 188 IPR017887 -
Stsc90959g00001 331 MobiDBLite consensus disorder prediction 311 331 - -
Stsc90959g00001 331 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90959g00001 331 MobiDBLite consensus disorder prediction 1 86 - -
Stsc90959g00001 331 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 32 322 IPR005333 GO:0003700
Stsc90959g00001 331 MobiDBLite consensus disorder prediction 295 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90959g00001 Stsc-Chr90959 28008 29629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90959g00001 26 331 TCP Transcription Factor Family AT3G27010 56.090 1.48e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc90959g00001 TCP 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90959g00001 - - aip:107604999 418.698