Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90956g00004 ATGAAATACTTGAAAGCTGTCATCAAAGAGACGTTGAGATTACACCCTCCTGGCCCTCTTTTGATTCCGCGGGAATGCGAACGAGCTTGCGAAATCCATGGATATCACATTCCAGCCAAAAGCAAGATCATAATCAATGCATGGGCGATCGCAATGGATCCGAACTACTGGACCGAACCGGAGAGGTTTTATCCCGAGAGATTTCTTGATAGCACAATCGATTTCAAAGGGAATAACTTCGAGTTCATTCCGTTTGGTGCTGGAAGAAGAATTTGCCCTGGAATGCACTACGGTGTTGCAAGTGTTGAGTTGATCCTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCTAGTGGGATCAAAAGTGAGGATTTGGATATGTCTGAATTGTTTGGAGCATCTGTTGTTAAAAAATCTGACTTGTCCTTGGTTCCTATGGTTGCTCGTTCTATTGCGTGA 462 0.4351 MKYLKAVIKETLRLHPPGPLLIPRECERACEIHGYHIPAKSKIIINAWAIAMDPNYWTEPERFYPERFLDSTIDFKGNNFEFIPFGAGRRICPGMHYGVASVELILALLLYHFDWKLPSGIKSEDLDMSELFGASVVKKSDLSLVPMVARSIA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90956g00004 153 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PRINTS E-class P450 group I signature 92 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PRINTS E-class P450 group I signature 82 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 SUPERFAMILY Cytochrome P450 1 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Stsc90956g00004 153 Pfam Cytochrome P450 1 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PANTHER OS08G0105600 PROTEIN 1 148 - -
Stsc90956g00004 153 Gene3D Cytochrome P450 1 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PRINTS P450 superfamily signature 83 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00004 153 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90956g00004 Stsc-Chr90956 24218 24748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90956g00004 1 146 Cytochrome P450 AT3G26330 57.534 7.03e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90956g00004 - - gmx:100797504 246.128