Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90956g00003 ATGGAGCTTTTAAGTCCGAAACGCGTGCAATCACACTGGCCAATCAAAGAGAAAGAGGTCAACAACCTCGTCAAACGGATCGCTTTCGAAGAAGGATCAATTATCAATCTTAGTCAAGCAGTTATATCAATGATGTTTTCGATTACTTCGATGGTGGCGTTTGGCAAGAAGTACAATGAACAAGAAGAGTTCATTAAAGCTGTTAGAGAGGTTTTGAATCTGGCTGGTGGTTTTAACATTGGAGAGTTGTTTCCATCGGCAAAATGGATAGAGAATCTAAGTGGGATTAGGCCTAAGCTTGAGGATTTGCATAGGAGACTTGATAGGATTCTAGAGATCATCATCAATGACCATAGACAATCAAGAACTAATAAAGAAGTGGAGGATCTTGTGGATGTTCTATTGAAATTTGAGGGGAGTAGTAGTGATGTGGATCTTCGCTTAACCAACGACAATGTCAAAGCCATAATCTTTGATGTCTTCACTGCCGGAAGTGACACATCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGAATCCAAAAATATTGAAGAAAGCAGAAGCTGAAGTGAGAGAGGTATTAGATAGAAGAACAACAGGNNNNNNNNNNACAAAGGTTGATGAAGCATGCATTGAAGAAATGAAATACTTGAAAGCTGTCATCAAAGAGACGTTGAGATTACACCCTCCTGGCCCTCTTTTGATTCCGCGGGAATGCGAACGAGCTTGCGAAATCCATGGATATCACATTCCAGCCAAAAGCAAGATCATAATCAATGCATGGGCGATCGCAATGGATCCGAACTACTGGACCGAACCGGAGAGGTTTTATCCCGAGAGATTTCTTGATAGCACAATCGATTTCAAAGGGAATAACTTCGAGTTCATTCCGTTTGGTGCTGGAAGAAGAATTTGCCCTGGAATGCACTACGGTGTTGCAAGTGTTGAGTTGATCCTTGCATTGTTGTTGTATCACTTTGATTGGAAGCTTCCTAGTGGGATCAAAAGTGAGGATTTGGATATGTCTGAATTGTTTGGAGCATCTGTTGTTAAAAAATCTGACTTGTCCTTGGTTCCTATGGTTGCTCGTTCTATTGCGTGA 1110 0.4108 MELLSPKRVQSHWPIKEKEVNNLVKRIAFEEGSIINLSQAVISMMFSITSMVAFGKKYNEQEEFIKAVREVLNLAGGFNIGELFPSAKWIENLSGIRPKLEDLHRRLDRILEIIINDHRQSRTNKEVEDLVDVLLKFEGSSSDVDLRLTNDNVKAIIFDVFTAGSDTSATTINWAMAEMMKNPKILKKAEAEVREVLDRRTTGXXXTKVDEACIEEMKYLKAVIKETLRLHPPGPLLIPRECERACEIHGYHIPAKSKIIINAWAIAMDPNYWTEPERFYPERFLDSTIDFKGNNFEFIPFGAGRRICPGMHYGVASVELILALLLYHFDWKLPSGIKSEDLDMSELFGASVVKKSDLSLVPMVARSIA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90956g00003 369 PANTHER OS08G0105600 PROTEIN 1 364 - -
Stsc90956g00003 369 Gene3D Cytochrome P450 1 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 262 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 298 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 308 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 172 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 Pfam Cytochrome P450 11 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 FunFam Os06g0641600 protein 57 361 - -
Stsc90956g00003 369 CDD CYP71-like 1 358 - -
Stsc90956g00003 369 SUPERFAMILY Cytochrome P450 2 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 301 310 IPR017972 GO:0005506|GO:0016705
Stsc90956g00003 369 PRINTS P450 superfamily signature 222 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS P450 superfamily signature 299 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc90956g00003 369 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90956g00003 Stsc-Chr90956 20952 24758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90956g00003 2 362 Cytochrome P450 AT3G26330 42.473 9.03e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90956g00003 - - gmx:100801936 459.529