Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90954g00007 ATGAATAATCCCCCATCAGAGAACCACAATGCAGAATCCAAAGAAATGGATAACCCAAAGTCCATTTCCACTGGAATTGGTAAAAGTGGTTTTATAGTCTCTATTCATGGCGAGGTTGAAGCGAAACATCGATTGCTTTTGGTTCAATGGATATCTACTCTTCTTCCTTCACTAAACTTACCAATAAATATTACGGATGATGTCTTAAGAGCATGCTTGAGGGATGGTATCGTTTTGTGTCAGATACTGAACAAGCTTCGCCCAGGTTCCATCCCGGTGGTTAGTGAATTTGATCATGAAGAAAATATAAAATCGTTTTTGAAAGCTATGGATGGAATGGGATTGCCTCTGTTTGAAATATCAGACTTGGAGAAGGGATCCATGAGGCCAGTTGTGGATTGTTTATTATCACTCCGAGCAAAGAGTTTGCAGAATGCTTATGGGGATAATAGTTCTTCTACAACCAATTCCAAAGTAGCGAGCCCTCATGGGATCACAGTTCCCAGTCTTCCGTTTCCACCACCATCCGAGATGACCATAAAGCACCATCGTTCCATGAGTAGCCCATTCTTGACAGAGTCACCAACTTCATTGATGCACCAGGTTGGTCTCAAGTTCCACGAGGTGTTTCAAGAGAAACAAGAAAGTTATGCAGATCTTTCTCCAACAAAAATATCAGAAATGGTGAAATCAGTCAGTTTAGATAGTGCTCCAACTCAGTCTCTTCTGGGTGTTGTGAATGGTATTCTTGAAGAAGCTGTTGAAAAACGAAATGGCGAAATACCTTATCGCGTGACCTGCTTGTTGAGAAAAGTTTCCCTAGAGCTTGAGCGTCGCATGTCAGCCCAAGCAGAGCACTCGCGAACTCAAAGCAATCTTTTCAAGGTTCGTGAAGAAAAGTATCAATCCAGAATTAGAGTACTTGAGGCGTTTGCATCTGGAACTATTACAGAAGAGGGTGAGGCTGAGAGGGTAATAGAGGAAGAAAATAAGTCTGATGACAAGGATTTTGAAAGGTCCATGAAAAAGCAGGAGGACAAAATTATGGAAATTTCAGCATTGACGGAAGATCTAGAAACAAGCAAAAAAGCACTTGAATTAAAATGCTCAGAGTTAGAAGCAGAAGCTATAGGGGCTAAAGCAGAAATAGAACATAAAACTAAAGCATATGAGCAGCAATTGGAAGAATGGCATAATAAGTGTAAGGAGCTAGAGTCTTCTTATGCTTCAAAATATAACGAGTGGAACATGAAAAAGAACAAGATGCTGAACGTTGTAAATTTTCAATCTAGTAACCTACAGAAAATGAAATTATCTTGGGAGTCCATTAAGCAAGATGTCATGCAAGAGCAAAATGTTTATGCAGAGGAGTGTAATCGTGTAGGTATAAAACTTAAATCACTGGCGCATGCAGCCGAGAACTACAAGGTTGTTATGGCTGAAAATAGAAAATTGTTCAATGAAATTCAAGAATTAAAAGGAAACATCAGAGTGTATTGTCGCATTAAACCATTTCTTAATGGGGCTAAAGAAAAACCCTCCATTGTTGAACACATTGGAGAAGATGATTTGGTTGTGGCAAATCCCTCCAAGCAAGGGAAAGATGCTCTTCGTTCCTTCAAGTTTAACAAGGTTTTCGGGCCTGGTGCAACTCAAGAGGAGGTATACACTGACATACAGCCACTTACAAGATCAGTTCTTGATGGATATAACGTATGCATATTTGCTTATGGTCAAACTGGTTCAGGGAAAACATACACAATGACTGGTCCAACCGGAGCAACTAGCGAGAATCTTGGTGTTAATTACCGGGCTCTGAATGATCTTTTCAGACTTTCCACTAGTAGAACGAGCTCCATTGAGTATGAGATCGGGGTTCAGATGGTTGAGATATACAACGAGCAACCAGAGGGATTAGCAGTGCCTGATGCAAGCATGTTCCCTGTGAATGCACCTTCAGATGTGATACATCTTATGGACATTGGACTAAAACATAGAGCTATTAGTGCTACAGCCATGAATGAAAGAAGTAGCCGTTCACACAGTGTGGTGACGATTCATGTTCGAGGGAAAGATTTGAACTCGGGTTCTACACTGGTTGGTAATCTTCATTTGGTGGATTTAGCAGGAAGTGAAAGGGTAGATAGATCTGAAGTAATTGGGGATAGGCTTAGGGAGGCACAACATATAAACAAATCACTTGCTGCATTTGGAGATGTGATCTTTGCCCTCTCTCAAAAGAGCTCCCATGTACCATATAGAAACAGCAAGCTCACTCAGCTTCTGCAAGCTTCTCTTGGTGGTCATGCAAAGACTCTCATGTTTATCCAAATCAACTCTGACGTAACTTCATATTCCGAAACATTGAGTACTCTCAAGTTTGCGGAGAGGGTTTCTGGAATTGAATTAGGAGCTGCAAGAAGTAATAAAGAGAGCAAGGATGTGAAAGAGTTAATGGAACAAGTGGCTTCTCTGAAGAACAGTATGTCAAGAAAAGATGAGGAGATTGAGCGGCTACAAATACTTCACCTTAAGCAAGTCCAAAGACCAAGCAGAAGTCCAAGGAATGAATCTCTCCGACGAAGTAAATCTGCTATTCCAGGAGACAAAATCCATCAGGAAAACTGGTCTTACACAGATTCGGATTTTGATGAAAGGTCTAACACTAATTCTGATTATGGTTATGGTTCTGAAAGTTCAAAATCATCAGAAAAGACGGAAAAACCGAAACTAGCACACAGAAGCGTTCAATCGATGAAGAAAGCATCAGTAAGAGTCTCATCTCCGACGAAAACACCAAGGGACAAAGTCTCATCTCCGACGAAAACACCAAGGGACACCCCGAAGATGTCATCAGCTCCAGCAATAAGGAAAAGCGCCAGCATTGGGCACATAAGACCGGCGGCAGCTTCAAAACGGTGGCAGTAA 2928 0.4122 MNNPPSENHNAESKEMDNPKSISTGIGKSGFIVSIHGEVEAKHRLLLVQWISTLLPSLNLPINITDDVLRACLRDGIVLCQILNKLRPGSIPVVSEFDHEENIKSFLKAMDGMGLPLFEISDLEKGSMRPVVDCLLSLRAKSLQNAYGDNSSSTTNSKVASPHGITVPSLPFPPPSEMTIKHHRSMSSPFLTESPTSLMHQVGLKFHEVFQEKQESYADLSPTKISEMVKSVSLDSAPTQSLLGVVNGILEEAVEKRNGEIPYRVTCLLRKVSLELERRMSAQAEHSRTQSNLFKVREEKYQSRIRVLEAFASGTITEEGEAERVIEEENKSDDKDFERSMKKQEDKIMEISALTEDLETSKKALELKCSELEAEAIGAKAEIEHKTKAYEQQLEEWHNKCKELESSYASKYNEWNMKKNKMLNVVNFQSSNLQKMKLSWESIKQDVMQEQNVYAEECNRVGIKLKSLAHAAENYKVVMAENRKLFNEIQELKGNIRVYCRIKPFLNGAKEKPSIVEHIGEDDLVVANPSKQGKDALRSFKFNKVFGPGATQEEVYTDIQPLTRSVLDGYNVCIFAYGQTGSGKTYTMTGPTGATSENLGVNYRALNDLFRLSTSRTSSIEYEIGVQMVEIYNEQPEGLAVPDASMFPVNAPSDVIHLMDIGLKHRAISATAMNERSSRSHSVVTIHVRGKDLNSGSTLVGNLHLVDLAGSERVDRSEVIGDRLREAQHINKSLAAFGDVIFALSQKSSHVPYRNSKLTQLLQASLGGHAKTLMFIQINSDVTSYSETLSTLKFAERVSGIELGAARSNKESKDVKELMEQVASLKNSMSRKDEEIERLQILHLKQVQRPSRSPRNESLRRSKSAIPGDKIHQENWSYTDSDFDERSNTNSDYGYGSESSKSSEKTEKPKLAHRSVQSMKKASVRVSSPTKTPRDKVSSPTKTPRDTPKMSSAPAIRKSASIGHIRPAAASKRWQ 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90954g00007 975 Gene3D - 332 373 - -
Stsc90954g00007 975 Pfam Calponin homology (CH) domain 46 139 IPR001715 GO:0005515
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 1 20 - -
Stsc90954g00007 975 PRINTS Kinesin heavy chain signature 569 590 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 PRINTS Kinesin heavy chain signature 702 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 PRINTS Kinesin heavy chain signature 751 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 PRINTS Kinesin heavy chain signature 671 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 147 171 - -
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 920 948 - -
Stsc90954g00007 975 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 437 642 - -
Stsc90954g00007 975 SMART ch_5 43 141 IPR001715 GO:0005515
Stsc90954g00007 975 ProSiteProfiles Calponin homology (CH) domain profile. 41 143 IPR001715 GO:0005515
Stsc90954g00007 975 Gene3D Kinesin motor domain 436 803 IPR036961 -
Stsc90954g00007 975 Coils Coil 355 414 - -
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 845 975 - -
Stsc90954g00007 975 PANTHER KINESIN-LIKE PROTEIN KLP-3 63 929 IPR027640 GO:0003777|GO:0007018
Stsc90954g00007 975 Coils Coil 475 495 - -
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 854 868 - -
Stsc90954g00007 975 Coils Coil 808 842 - -
Stsc90954g00007 975 SMART kinesin_4 493 809 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 Pfam Microtubule binding 481 635 IPR031852 GO:0008017
Stsc90954g00007 975 Gene3D - 35 144 IPR036872 -
Stsc90954g00007 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 495 839 IPR027417 -
Stsc90954g00007 975 Pfam Kinesin motor domain 638 800 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 ProSiteProfiles Kinesin motor domain profile. 495 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc90954g00007 975 SUPERFAMILY Calponin-homology domain, CH-domain 39 139 IPR036872 -
Stsc90954g00007 975 FunFam Kinesin-related protein3 643 843 - -
Stsc90954g00007 975 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90954g00007 Stsc-Chr90954 33587 38473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90954g00007 384 835 Calmodulin-binding Proteins AT5G65930 33.962 1.85e-65 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90954g00007 K10406 - qsa:O6P43_008574 991.49