Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90943g00003 ATGGAGTGTGTCACTGTGGTGAAGCCAGAGGCAGAGGAAGTTACAGGAGAAGTGCAGAAAGACCAGGAAATGGCTCTGGAATCTTCTCCTCCTGCTGTGGAGGACAGTGTTGATAGAGTTAGCAGCACTGACATGGAGGAACAACAGGTCCAGAACAACAACGTTGTTGATGATAGCAAGTCTTTGCTGGCATCTGGACTGAATGCTGTGATTTCTAGCCTAAGTCAACTTACCATCTTCTACAATGGAAGTGTATGTGTGTATGATGGACTCCCTGCTGACAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCAAAGTCATCTGAAATGAAGAAGATTAATCCGCAATCTCCTTTTGTTTCAGCTGTTCCCACGAGGCCTTCTTCGCCTCCTGCAACCTCCAACAATGTTGCTTCGCCTCAGTCAATCTGCTTCCCTGCAGAGAAGAATTCCATCTGCAGGCTGCAAGAGTTCCCAATAGCACGCAGGCATTCGCTGCAAAGGTTTCTTGAGAAGCGGCGAGACAGGCTGGGGAGCAAAGCCCCGTATCCTAACTTGTCAACAACAAAAACGGCTGACAACATCGAGAACAACTTCAGTGCTGACAATGCACCGGATTTGGTTAAGCGATCAGAAGAGGAGTTGCAGCCAACTGTTGCTGCCTCTTGA 675 0.4815 MECVTVVKPEAEEVTGEVQKDQEMALESSPPAVEDSVDRVSSTDMEEQQVQNNNVVDDSKSLLASGLNAVISSLSQLTIFYNGSVCVYDGLPADKVHEIMLIAAAAAKSSEMKKINPQSPFVSAVPTRPSSPPATSNNVASPQSICFPAEKNSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPNLSTTKTADNIENNFSADNAPDLVKRSEEELQPTVAAS 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90943g00003 224 MobiDBLite consensus disorder prediction 1 42 - -
Stsc90943g00003 224 MobiDBLite consensus disorder prediction 184 203 - -
Stsc90943g00003 224 MobiDBLite consensus disorder prediction 179 224 - -
Stsc90943g00003 224 Pfam Jas motif 161 185 IPR018467 -
Stsc90943g00003 224 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 49 195 IPR040390 -
Stsc90943g00003 224 SMART tify_2 70 105 IPR010399 -
Stsc90943g00003 224 Pfam tify domain 75 104 IPR010399 -
Stsc90943g00003 224 ProSiteProfiles Tify domain profile. 70 105 IPR010399 -
Stsc90943g00003 224 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90943g00003 Stsc-Chr90943 13158 16660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90943g00003 76 193 Tify Gene Family AT5G20900 50.833 4.11e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc90943g00003 tify 3.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90943g00003 K13464 - gmx:100306045 239.965