Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90938g00007 ATGGAGCCGAATGAAGTTGGAATCCTTGGAATTTGGGGTATGGGAGGCATAGGTAAAACAACCATTGCTCGAGTTATATTCAATAAATATTCCTCTCAATACGAAGGTTGTTGCTTCTTGGAAAATGAGAGAGAACAATCACAAACGCAGCGTGGCCTGGATGATTTGCGTATGCAACTTGTTTCTCAACTCCTTGTGAAATGTCCTCCCAACGCAATATCTGCCAAGAGAATGTTGAGTCGGAAAAAGGCTCTCATAGTGGTTGACGATGTGGATTCATCAACCAAGTTAAAGCATCTAATAGGAGAACAAATCTGTTTGGGAGCAGGTAGCAGCATCATTGTAACAACTAGAGACAAGCAAGTACTGATTGCTGCAAGAGTGCATCACATATACAAGGTCCAGGAACTGAGCTCTGAAAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGATATCCTGAAACTGGATATGAGGAGCTTTCAAAAATGGCAATTAGTTTTGCAAATGGCATTCCATTAGCTTTAGAAGTACTGGGATCCTCTTTATGCTCAAGAAGTGCAGAAGCTTGGGAAAGTGAACTGAGAAAACTCAATACTCATCTCAATCCGAGCATTCTCGATGTGGGGAAGACAAGGAATGTCATAAGGTTTCTAGACTCCTGTGATTTCTTTGGAGCCATTGGAATAGACAACCTCCAACGTAAGGCTCTTATAACTATTTCACGGTACAACACAATAGAAATGCATGACCTGATAGAACAAATGGGTTTGGAAATTGTCTTCAACGAATCAACTAAGGATGTCAAAAAGCGTAGTCGATTGAGGAATCCTGAGGATGTCAGGAATTTATTAGAAAACAGTAAGGGAGAAAAGTCAGTTGAAGGCATCATGTGTGACTTGTCCCAAATTGGAGATCTACGCTTAAATGCGAACTCCTTTAAAAATATGCCTCATCTAAGATTTCTTAAGCTTTATGCTCCTTGGGATCGAAAAGCGTCAATTGTGTACGTTCCCAAAACCCTGATGTTTAGTGCTAAACTCAGGTATTTGGAGTGGAATAGTTATCCTCTGAATTCTCTGCCATCAAGGTTTTGTACAGAGAAGCTTGTTGAGCTTTGGATGCCCAACAGTCAAATTTCTAAACTCTGGGAGGGAACGCAGGATCTTCCCAATTTGACAAAGGTTTACCTTAATGGATGTAAACAGTTGGTAGAGCTTCCGGATTTCAGTAAAGCAACAAAACTTGAAATAATTTTCCTTAACGGGTGTGAAAAACTATGTCAACTTCATCCATCAATTTTATCCATCCAATCTCTTGAGTATTTGTTTCTGAATGGTTGCAAAGAATTGAAGAGTGTCAAAGGCCAATTGAAGTCTCTTAAACTACTTGCTGCTAATAATTGTTCTCTGGAAGAATTTACACTGTCAGCTGAGGAACTGCACTATTTGTGTTTGTCTTTGAGGGGAATCAAGAGTCTACAAAATGAATTATGTTGCTTTAAATCTCTTTACTATCTTAGTTTTTATGATTGCAGAGAGCTAACTGAGCTGCCACACAACATGAAAGCCCTATCAAGGTTAACGAGTCTAACAGTGAGTGGTTGTTGTGCTCTTCGATCTATACCAGAGCTTCCACCATTCATTCAATTCTTTAAGGCTATTGATTGTACATCACTGGAAACAATATTCAGTTTGAAGAGAGTATTTAGTTTGAATACGAGAAACATCTCATTTGTAAATTGCGTGAGATTGAAAGAGGAGTCGGTGAATGATATTATGGAAGATGCCCATCTCACAATATTCAGAAATGTTTTCTTGTCACGAGCTACTGTTGATGTGGATGGTCATGTTTGGCACCCAGGGGACAAAGTTCCAGAGCGGTTTTTCAAGTGTCGGACAGAAGAAGCATCCATAACAATCCAACTAGAACAATGTGAGTACCAGTTGTTGGGTTTCGTCTTCTGTTGTGTTGTTTCTCAAAATTTACCTCATGATTATTTTTGTAAATTGGGTGGTGTCGACATCAAATGTGAATACCTACACCTCGGATATAGTATAGAGCATACAAGTTATTTTTGGCCAGATTTTAATCGTAAAAGAAGATCATTGGACTCTGATCACGTTTTAATTTGGACTAATCAAGATGGTAGCTCCAAGGTATTGAGTAAAATGAAAAGGTACAAAGGCAGTGATGATGATGATGACAGCACTTGCAAACGAAAGATGTCATTCAGATTCAGTGTTGATAGACCTGAGAAAGGGAAGAGAGTGGAAGAAAGGGAAGAAGATGATAAAGAATGTTATATCAAAGGGTGTGGGGTAATTCCAGTGTACGCCTCAACTGTAGTGGATGCCATTCAAAAACTTGAATTGGAGTTCAACCTGAACGCTCATCATGACTCCATCCCATCATGGATGGATCTCGACACATTGAAAAGTCACATGATCCGGAAGAGTAGAGGAAAATCAAAACTGTGGTGGTAA 2493 0.3935 MEPNEVGILGIWGMGGIGKTTIARVIFNKYSSQYEGCCFLENEREQSQTQRGLDDLRMQLVSQLLVKCPPNAISAKRMLSRKKALIVVDDVDSSTKLKHLIGEQICLGAGSSIIVTTRDKQVLIAARVHHIYKVQELSSESSLELFCLKAFHKRYPETGYEELSKMAISFANGIPLALEVLGSSLCSRSAEAWESELRKLNTHLNPSILDVGKTRNVIRFLDSCDFFGAIGIDNLQRKALITISRYNTIEMHDLIEQMGLEIVFNESTKDVKKRSRLRNPEDVRNLLENSKGEKSVEGIMCDLSQIGDLRLNANSFKNMPHLRFLKLYAPWDRKASIVYVPKTLMFSAKLRYLEWNSYPLNSLPSRFCTEKLVELWMPNSQISKLWEGTQDLPNLTKVYLNGCKQLVELPDFSKATKLEIIFLNGCEKLCQLHPSILSIQSLEYLFLNGCKELKSVKGQLKSLKLLAANNCSLEEFTLSAEELHYLCLSLRGIKSLQNELCCFKSLYYLSFYDCRELTELPHNMKALSRLTSLTVSGCCALRSIPELPPFIQFFKAIDCTSLETIFSLKRVFSLNTRNISFVNCVRLKEESVNDIMEDAHLTIFRNVFLSRATVDVDGHVWHPGDKVPERFFKCRTEEASITIQLEQCEYQLLGFVFCCVVSQNLPHDYFCKLGGVDIKCEYLHLGYSIEHTSYFWPDFNRKRRSLDSDHVLIWTNQDGSSKVLSKMKRYKGSDDDDDSTCKRKMSFRFSVDRPEKGKRVEEREEDDKECYIKGCGVIPVYASTVVDAIQKLELEFNLNAHHDSIPSWMDLDTLKSHMIRKSRGKSKLWW 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90938g00007 830 Gene3D Ribonuclease Inhibitor 265 457 IPR032675 -
Stsc90938g00007 830 Gene3D - 136 215 IPR042197 -
Stsc90938g00007 830 Pfam Leucine Rich Repeat 371 390 IPR011713 -
Stsc90938g00007 830 Gene3D Ribonuclease Inhibitor 458 565 IPR032675 -
Stsc90938g00007 830 PRINTS Disease resistance protein signature 8 23 - -
Stsc90938g00007 830 PRINTS Disease resistance protein signature 437 453 - -
Stsc90938g00007 830 PRINTS Disease resistance protein signature 78 92 - -
Stsc90938g00007 830 PRINTS Disease resistance protein signature 171 185 - -
Stsc90938g00007 830 Pfam C-JID domain 623 783 IPR045344 -
Stsc90938g00007 830 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 565 IPR044974 GO:0006952
Stsc90938g00007 830 SUPERFAMILY L domain-like 299 581 - -
Stsc90938g00007 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 211 IPR027417 -
Stsc90938g00007 830 Gene3D - 1 131 IPR027417 -
Stsc90938g00007 830 Pfam NB-ARC domain 2 208 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90938g00007 Stsc-Chr90938 46043 49081 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90938g00007 2 604 WRKY Transcription Factor Family AT5G45050 30.429 1.47e-75 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90938g00007 - - adu:110278282 878.626