Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90938g00001 ATGGCTTCCGAAGCTTCCAGAAACATTGATCTCACGCTAGGAGAGCCCAAGGGGCCCAAGGAGGAGCCCGACACGGAAGAGGGCTCCCCGTCACCGTCTCCGCCATCTGGCATACGCGTCATGCCGGTGGCAGTGCACATGCCTATGTCCATGAACAAGGCCCTAGTCCAAGCCCAAGCCCAACCGAATCAAAAGAGAGCCTCCACGAAGGACAGGCACACCAAGGTGGAGGGACGCGGCAGGAGAATCCGAATGCCTGCCACGTGTGCGGCCCGGATCTTCCAGCTCACCCGGGAGCTCGGCCACAAGTCCGATGGAGAAACCATCCGGTGGCTTCTGGAGCACGCCGAGCCAGCTATCATCGCAGCCACCGGAACCGGCACCGTCCCCGCCATCGCCATGTCCGTTAACGGAACACTTAAGATCCCAACCACCAAGCCACTTTCAGGATCCGACCCGGAACAGGGAGACCCGCCCTGCAAGAAGAAGCGCAAAAGACCCGCCAACAGTGCCTACGTGGACATAAACGAAAGTGCTGTTTCAGTCTCCGCAGGCTTGACGGTTACAACAAATTCCGTAACTAACACCGTAACAAACTCCACAACTCGCATAACAAACTCTGTAACTGCCGCTATAATACCGCAGCAAACCGCTATTGCCTTGCCGCAAAACGCGGTACCTGCCATGTGGACGGCGATTCCCTCCAACGCTTTCTTCGTCGTGCCTTCCGTTGCGGCGGCGGGGCCTTCCAACGCGCCGCAATTCTTCACATTCGCGCGTCCGATTTCGGCGTTTGTTTCGTCGGTTATGGCGCCGGTTCATATTCAACCGGTCGGTTCGACAGCTCCGTCGTCGAAATCGCCGCCAAGAGCGACGGTCATGGCGCCGAGCAGTGCAACTACGACAACGCAGACGCTGAGGGATTTTTCACTGGAGATTTACGATAAACAAGAGCTTCAGTTCATGTCGAAGTCGAGTTCAAAACATTAA 990 0.5697 MASEASRNIDLTLGEPKGPKEEPDTEEGSPSPSPPSGIRVMPVAVHMPMSMNKALVQAQAQPNQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTKPLSGSDPEQGDPPCKKKRKRPANSAYVDINESAVSVSAGLTVTTNSVTNTVTNSTTRITNSVTAAIIPQQTAIALPQNAVPAMWTAIPSNAFFVVPSVAAAGPSNAPQFFTFARPISAFVSSVMAPVHIQPVGSTAPSSKSPPRATVMAPSSATTTTQTLRDFSLEIYDKQELQFMSKSSSKH 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90938g00001 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 274 IPR005333 GO:0003700
Stsc90938g00001 329 Pfam TCP family transcription factor 68 155 IPR017887 -
Stsc90938g00001 329 ProSiteProfiles TCP domain profile. 69 123 IPR017887 -
Stsc90938g00001 329 MobiDBLite consensus disorder prediction 143 168 - -
Stsc90938g00001 329 MobiDBLite consensus disorder prediction 278 301 - -
Stsc90938g00001 329 MobiDBLite consensus disorder prediction 57 79 - -
Stsc90938g00001 329 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90938g00001 Stsc-Chr90938 5523 6512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90938g00001 62 328 TCP Transcription Factor Family AT2G45680 54.785 1.76e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Stsc90938g00001 TCP 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90938g00001 - - aip:107626029 468.003