Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90935g00002 ATGACTCAGGCTGTGGAGGTTCTAAACAGGTATGGAACGGATCTGGTTGGTGAAGCCAGGGGTTCTGATTCTGAGTGTTTGACGGGTTTTGAGTGTTTCTTGAACATTGTGAGGGCACTGGGGATGGGATCATGCATCTCAGAGGCTGGCGGTCGCTCTCCTCCCCTTCTTCCGTTCCAGCCTGACTCCAACTTGGATGGTGGGAAGAGGAGGAGGTTGAAGGGTTCCCCTTCCTTTGATTCCAAAATTCCTGGGAGGATGCACCTGAATGGGTCCAGCGAAGTTGCATCATTGTACTGCAAGCAAGGTAAAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCCAATGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAGGAAAGGCAGTGCCGCAGGAAGTTACAAATCTGAAGAAATTGGAATTAGACTGGTTGACGAGAAACCTATGACTGATCATGAGCTTGAAGGAACAGATACTATTTTGACACTAAAAGAATCCTTTTTGAAGGCTTGTAAGATTATGGATAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGCGGGACTACAGCTGTTACCTTGGTCAAGCAGGGCAAGGATCTTGTTATTGGAAATGTTGGGGACTCTAGAGCTATATTGGGTACCCGAGATCATGATGATAATCTTGTTGCTGTGCAATTGACAATTGACCTCAAGCCAAATCTTCCAAGGGAAGAAGAGCGAATTAAGCTTCGTAAAGGAAGGGTCTTTTCCCTTCAGAATGAACCGGATGTTGCTCGTGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCAAGGGCCTTTGGAGATTTTTGCTTGAAGGACTTTGGACTGATTTCAGTTCCAGATGTGTCATATCATCGCCTTACTGAGAATGATGAATTTGTTGTATTAGCAACAGATGGGATATGGGATGTTTTATCAAATGAAGAGGTTGTGGACATAGTAGCATCTGCTCCACGCCCTAATGCGGCTCGATCACTGGTGGAGTCAGCTGTTAAAGCATGGAGGATGAAGTTCCCTTTGTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCGTTGATTCGGACTCAGGTTCAGCATCTACAACAGATGACTTGACGCTAGAGTCATCAATTGACCAATCTGAGCAGTCTACTCTCCTCAGTGAGAAGGGAACTGGCATGGATGCTGAAAAACAGCAGCAATAG 1275 0.4541 MTQAVEVLNRYGTDLVGEARGSDSECLTGFECFLNIVRALGMGSCISEAGGRSPPLLPFQPDSNLDGGKRRRLKGSPSFDSKIPGRMHLNGSSEVASLYCKQGKKGINQDAMLVWENFCSNEDTIFCGVFDGHGPYGHRVARKGSAAGSYKSEEIGIRLVDEKPMTDHELEGTDTILTLKESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGKDLVIGNVGDSRAILGTRDHDDNLVAVQLTIDLKPNLPREEERIKLRKGRVFSLQNEPDVARVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTENDEFVVLATDGIWDVLSNEEVVDIVASAPRPNAARSLVESAVKAWRMKFPLCKVDDCAAVCLFVDSDSGSASTTDDLTLESSIDQSEQSTLLSEKGTGMDAEKQQQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90935g00002 424 SMART PP2C_4 84 380 IPR001932 -
Stsc90935g00002 424 SUPERFAMILY PP2C-like 92 383 IPR036457 -
Stsc90935g00002 424 Gene3D - 89 384 IPR036457 -
Stsc90935g00002 424 MobiDBLite consensus disorder prediction 387 424 - -
Stsc90935g00002 424 Pfam Protein phosphatase 2C 109 348 IPR001932 -
Stsc90935g00002 424 ProSiteProfiles PPM-type phosphatase domain profile. 95 382 IPR001932 -
Stsc90935g00002 424 CDD PP2Cc 95 382 IPR001932 -
Stsc90935g00002 424 PANTHER PROTEIN PHOSPHATASE 82 380 IPR015655 GO:0004722|GO:0006470
Stsc90935g00002 424 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90935g00002 Stsc-Chr90935 8543 11718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90935g00002 68 424 PP2C-type Phosphatase Gene Family AT1G16220 55.039 1.00e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90935g00002 - - gmx:100802479 706.057