Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90933g00008 ATGGATGACTTGTCCAAGAGTCAGATGTTTGTGGTTCATGGTGTTGCTGCAGTTGGTTCTGTGGCTTTTGCCTCTGCTTTCACTTATCCCCTCGACACCATCAAAGTCCTCACTCAGGTTGCTTCTAGTTCCGGTAAACAATTGAATGCTGCCGAGCTCTTGATTAGAATTCTCTCTTTCTCTGGTAATTCAGGTTTGTTCAGTGGTTATGGCTCGTTAGCACTTGGAAGGGTTCTTGGTCTCGGAGCTCGATTTGGGGTCTATGAAATCATCACTGCCTTTTATAAAGATGGTCTGGAAGATAAGTATGTCTCTGCTTCTGATGCTCTTTTGGCTGGAATGGCAGCCGGAGCTGTAGAGGCTTTGATAAGCTCTCCGTTTGAACTTATCAAGATTCGTGAACAGGTTACCTCAGCTTCATACATTCCAAACTCTACTTTTGCTTTGGAAAAGGGAGCCCAGCCACCTTTAATTTCAAGATTACTCAGTGGTTGTTATCCTGTCAAGAGATCCTTGAACCAATATGTCGGTCTCATCTCTACCCTATCTACCAAAAATACTAATTTGACGAGTGCATTGCTGGAGTATCCTTGGATGATGACAGGATCTGGGAAGCCACCATCAGTTTGCAGTGTCAGAAGGCCTTCTGATATTATATCATTGGAAGGATGGGGAACATTATGGAGAGGTCTTCGTTCGGGAATTGCTCGAGATTCCGTGTTTGGTGGTGTATTTTTCTCAAGTTGGCAGTTTCTACATCAAGCTATGCTTGATTGGAAGGCTGTAGGGATGGATCCTCCGCCCAGGTCAGATGAAGAAGTTGGTCCATTGTCTCCTTTATTTGTTAGTATTGCTGCTGGATTCTCAGCTTCAGTTGCTGCTGCGGCTTCTCATGCCTTTGATACTACAAGAGCTAGATCACAATGCACTGTGCTACCAAAGTATGTTTCAATGGAGAGAAAGCTCATGAAGTGGAAACGACCAGGAAACAAGTTTGAAAGATATACTGGGATTCATCCTTCTGACAGGAATCTGTTATTCCGTGGTCTTCGGTGGCGGATGGCTCGCTCCGGGCTTGCATCATTCATGATTGTAGGAAGTTATTTCTTTGCTGTTGATCATCTTGCTTCTAATTTGACTTGA 1143 0.4418 MDDLSKSQMFVVHGVAAVGSVAFASAFTYPLDTIKVLTQVASSSGKQLNAAELLIRILSFSGNSGLFSGYGSLALGRVLGLGARFGVYEIITAFYKDGLEDKYVSASDALLAGMAAGAVEALISSPFELIKIREQVTSASYIPNSTFALEKGAQPPLISRLLSGCYPVKRSLNQYVGLISTLSTKNTNLTSALLEYPWMMTGSGKPPSVCSVRRPSDIISLEGWGTLWRGLRSGIARDSVFGGVFFSSWQFLHQAMLDWKAVGMDPPPRSDEEVGPLSPLFVSIAAGFSASVAAAASHAFDTTRARSQCTVLPKYVSMERKLMKWKRPGNKFERYTGIHPSDRNLLFRGLRWRMARSGLASFMIVGSYFFAVDHLASNLT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90933g00008 380 Gene3D Mitochondrial carrier domain 10 378 IPR023395 -
Stsc90933g00008 380 Pfam Mitochondrial carrier protein 10 96 IPR018108 -
Stsc90933g00008 380 Pfam Mitochondrial carrier protein 106 255 IPR018108 -
Stsc90933g00008 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Stsc90933g00008 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 15 368 - -
Stsc90933g00008 380 SUPERFAMILY Mitochondrial carrier 10 365 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90933g00008 Stsc-Chr90933 30954 34307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90933g00008 29 258 Antiporters AT1G79900 24.242 2.12e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90933g00008 - - gmx:100813634 545.043