Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90933g00002 ATGGCTGCTTCCCTTGGCACTCAGAACAAAAATGAAATGCCACTTAAACATGTTATGATCCACATGCATGGTACTAGTGATGCAGAAGCAGCAAAGGCAAGCCAAGGCACTGAAGAAAACAATAACACTACTGACTACTCTCAAAGATCACAGTGGCTCCGAGCAGCAGTGCTCGGGGCCAATGATGGACTTGTCTCAGTGGCATCACTCATGATGGGCGTTGGAGCTGTGAACAAGAACGTTGCAGCCATGCTCATAGCCGGATTTGCAGGGCTAGTAGCCGGAGCATGCAGCATGGCGATTGGAGAGTTTGTCTCTGTCTACACTCAACTAGACATAGAAGTAGCTCAAATAAAAAGAGAAAGGGAAGTCAACAATGAATTGGAGACAAGAGAAGGTGGTAGTGAAGAGGAGAAGCTGCCAAATCCTTTTCAAGCGGCGATAGTGTCAGCAATAGCATTTTCTGTTGGTGCAGCAGTGCCACTGATAGCAGCAGTGTTTATAAGGGAGTATAGGATCAGGGTTGGTGTTGTTGCTGCTGTGTCTAGCTTGGCATTGTTGGNNNNNNNNNNTAGAAGGTCTTGTATCAGAGTTCTGATTGGAGGTTGGTTGGCTATGGCTATAACTTTCGGCCTCACCAAGTTAATAAGCTTAAAGGGAATGTAA 666 0.455 MAASLGTQNKNEMPLKHVMIHMHGTSDAEAAKASQGTEENNNTTDYSQRSQWLRAAVLGANDGLVSVASLMMGVGAVNKNVAAMLIAGFAGLVAGACSMAIGEFVSVYTQLDIEVAQIKREREVNNELETREGGSEEEKLPNPFQAAIVSAIAFSVGAAVPLIAAVFIREYRIRVGVVAAVSSLALLXXXXRRSCIRVLIGGWLAMAITFGLTKLISLKGM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90933g00002 221 MobiDBLite consensus disorder prediction 30 45 - -
Stsc90933g00002 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 31 217 IPR008217 GO:0005384|GO:0030026
Stsc90933g00002 221 Pfam VIT family 53 129 IPR008217 GO:0005384|GO:0030026
Stsc90933g00002 221 Pfam VIT family 135 213 IPR008217 GO:0005384|GO:0030026
Stsc90933g00002 221 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90933g00002 Stsc-Chr90933 4629 5847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90933g00002 38 221 Nodulin-like Gene Family AT3G43660 58.763 1.39e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90933g00002 K22736 - gmx:100817158 248.825