Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90932g00006 ATGATACAGCAGTACACGTGCGAGGTTGACGAGGTTTACGTCCCAAAGGTTGGAATGTGGTTTGAAGGCGTCGAGGATGCTGGATTATTTTACAAAGAGTATGCCAAACGAGCAGGTTTCTCTACAAAGATAAGTTACTCAAATAGATGTAAGGAGACCAAGGAAATAAAGAACCAACTTATCACTTGTACTAGAGAAGGGAGATGGACATCAGAGTTTCCTTCCTTAGAGAAGACGAACCCGATACATGCTGCAAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGAGTCGACATTGGTGCATTTCGAAGGTTATTCTCCATCATTCACATCCATGCTGTGCTGAGAAAGCTCAGATGTTACCACAACATAGGGGCCAGCTTGGACGGGTCATCAAAAAGGATATGAGGAATTACGTCAATAGGGAGGTTCGGAATGTGACGGAAGAGGAAGATGCAAAAGAGCTTGGAAAGGGAATTCGAATAGATTATGCCACGAACAAGGACGAGACTCAATCAAACAAAAGAGTTGTCACAAGAAGCTTGCAACCAGTTTAA 564 0.4273 MIQQYTCEVDEVYVPKVGMWFEGVEDAGLFYKEYAKRAGFSTKISYSNRCKETKEIKNQLITCTREGRWTSEFPSLEKTNPIHAANCPARIYVHIDKKSRHWCISKVILHHSHPCCAEKAQMLPQHRGQLGRVIKKDMRNYVNREVRNVTEEEDAKELGKGIRIDYATNKDETQSNKRVVTRSLQPV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90932g00006 187 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 130 - -
Stsc90932g00006 187 Pfam FAR1 DNA-binding domain 30 115 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90932g00006 Stsc-Chr90932 12338 13378 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc90932g00006 FAR1 1.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90932g00006 - - aip:107636690 162.155