Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90925g00003 ATGGACACGCGCCGAACTCCACGCGCCGTCATTGACCCCAAGGTTCGCAAGGTCGGGTTCTTTGCTCCGCCTGAACCATCGCAATCGGGTCTTCCCGACCCGATCCCTCTTCCTTCCTCTTCACTTTCTCCCGTTATGATCCCTCCGCCGCGGCACTCGTCGGAAAATCTCCTTCATCATGCCCGTCCGCCGGCGTCGGTTGTGTCAGGTGCGTCTTCTGTTTCCATCGAAGGTTCTGTTGTTGCTGGGGGGAGTTACGGGAGCTCATCCGAGCTCTTTCCAGCTCCGATGTCTCCGGCGTCGTCTTCGTACTCTTCCAGCAGGTTCGTTGGCGGTGGTGACGGTGATTATTGTTTAAATGGAGTTGCGGTGGCTTCGCCTGGTCGCGGCGGAGGGAAGGCGGCGGCTTCGTTTCCTCGTGGCGGATTCGAGTTGACGGAGGCTAAGGCTAGCAGCGTTCCGGCGAGCGAATTGACTACAGTCTCGGTGGTGAATGATTCCTCCCTAGGGATTCGAGAAAGAGATAAAGCAGATAATGGACGAGGATCAGCATTGGAAATGAAAGACCAAACTGCAAATTCAAAGCAGAAGAAAGATAAGACAACAAAAGCTGAAAGACGTGCTCTTCAAGAAGCACAACGAGCTGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAAATGTAACTTCTGGGAATGCAAAACCAGCTAAGGCCACAAAGCCCCCACAAAAATATGAACATGGGAGTCTACTTCCAGATCTTGAGGCAAAATTTTTCCAGCTTGATACAGTTCATCCTGCAGTTTATAAGGCTGGTTTGCAATATCTTTCTGGCAATATATATGGCAGTAATGCTCGTTGCATTGCAATGCTTCAAGCATTTCAAGATGCCATCAGAGACTACCGAGTTCCACCAGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAAGTAGCTATGTTTCATTTCTCATTGAGTGTCGGCCTCTTTCTATCAGCATGGGAAATGCAATAAAATTTCTCAAAACTCGAATTGCTAAGCTACCTTTGACACTGTCCGAGTCAGAATCAAAAGCTTCTCTCCACTCAGATATTGAGCGTTTTATAAACGAGAAGATTATACTTGCTGACAAGGTGATAGTCAAGCACGCAGTCACAAAGATAAGAGATGGTGATGTTCTTCTTACTTATGGATTGTCATCGGCTGTTGAAATGCTACTGTTACATGCACATGATTTAGGAAAACAGTTCCGAGTTATAATAGTTGATTCTCGTCCACAGCTTAGAGGAAAAATTTTGCTTCGGAGGTTGGTGGAGAAAGGTCTTAGCTGTACATATACTCAAATAAATGCACTTTCCTACATAATGCATGAAGTCACTCGCGTGTTTTTGGGTGCTTCATCAATTTTGTCAAATGGAACAGTTTATTCAGGAGTTGGGACTGCATGTGTTGCAATGATTGCTCATTCATTTCGTGTCCCTGTTTTAGTGTGTTGTGAGGCTTACAAATTTAATGAAAGGGTACAACTTGATTCAATATGCTCAAATGAACTTGGTGATCCAGAAGTCATTTCCAAGGTTCTGGGTAGGGAGGATGTGAACTACTTGGATGGTTGGGCCAATACTGAAAATCTGCAACTTCTTAATCTGGTTTATGATGCAACACCTTCAGATTATATTTCAATGATAGTCACAGATTATGGCATGGTCCCACCAACAAGTGTCCCTGTAATTGAAAAAGAAGAAGAGGAAGATCTCACCAGTCACCACCATCGCCGCCAAACAGGGACGCACAAAACCGGCAACGGCGGTGACGATCGAGTTTTGGCTCCTCCCGTGGAAGACGAAGAAGAAGATGACGTGGTGGCAACGAAGCAGCGGCGACGACCGAGATCTGACTTCTCCTATGGATGCACGAAGAAAAAGACGCGATGGCTGGACGGTGATGACGCAGTGGCTCTAGGCGGTGGTGGTACGGTGGCGATGTCGTGGAGGGAGGAAGAAAGGAAAAAAGATGATTAG 2031 0.4677 MDTRRTPRAVIDPKVRKVGFFAPPEPSQSGLPDPIPLPSSSLSPVMIPPPRHSSENLLHHARPPASVVSGASSVSIEGSVVAGGSYGSSSELFPAPMSPASSSYSSSRFVGGGDGDYCLNGVAVASPGRGGGKAAASFPRGGFELTEAKASSVPASELTTVSVVNDSSLGIRERDKADNGRGSALEMKDQTANSKQKKDKTTKAERRALQEAQRAAKAAAKAEGNKASGNVTSGNAKPAKATKPPQKYEHGSLLPDLEAKFFQLDTVHPAVYKAGLQYLSGNIYGSNARCIAMLQAFQDAIRDYRVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIKFLKTRIAKLPLTLSESESKASLHSDIERFINEKIILADKVIVKHAVTKIRDGDVLLTYGLSSAVEMLLLHAHDLGKQFRVIIVDSRPQLRGKILLRRLVEKGLSCTYTQINALSYIMHEVTRVFLGASSILSNGTVYSGVGTACVAMIAHSFRVPVLVCCEAYKFNERVQLDSICSNELGDPEVISKVLGREDVNYLDGWANTENLQLLNLVYDATPSDYISMIVTDYGMVPPTSVPVIEKEEEEDLTSHHHRRQTGTHKTGNGGDDRVLAPPVEDEEEDDVVATKQRRRPRSDFSYGCTKKKTRWLDGDDAVALGGGGTVAMSWREEERKKDD 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90925g00003 676 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 245 587 - -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 172 250 - -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 584 639 - -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 27 45 - -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 623 639 - -
Stsc90925g00003 676 Pfam Initiation factor 2 subunit family 283 575 IPR000649 GO:0044237
Stsc90925g00003 676 Gene3D - 379 585 IPR042529 -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 17 57 - -
Stsc90925g00003 676 MobiDBLite consensus disorder prediction 191 212 - -
Stsc90925g00003 676 SUPERFAMILY NagB/RpiA/CoA transferase-like 267 583 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90925g00003 Stsc-Chr90925 32675 38667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90925g00003 247 588 Eukaryotic Initiation Factors Gene Family AT5G38640 78.363 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90925g00003 K03680 - gmx:100785938 650.203