Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90924g00001 ATGAGCTTCAAGAAGAAGAGAGATGTTGTTGCTGGCTTGCAAGGAAATAGCGAGAACGTGAAATATGTAGGTGGGGATATGTTTGAGGCAATTCCTGCTCCAGATGCTCTTTTGATGAAGTGCATATTACATGATTGGGATGACGAGGAATGTGTAAAACTCCTGAAGAAATGCAAGGAGGCAATAATGAAGAAAGGCAAAAAAGGAAAAGTGATAATAATAGACATAGTCGTAGGGAATGAGAATGGAGATAAAGAATCACTAGGAACACAACTCCTCTTTGATATGGCGATGATGGTGCTTGTCAACGGAAGGGAGAGAAATGAGAAAGAATGGGCCAAGCTATTTTTCTCTTCTGGTTTCAATAATTACAAGATAATCCCAATTATGATGAGTTCAAGGTCCTTGATTGAGGTTTATCCATAG 426 0.392 MSFKKKRDVVAGLQGNSENVKYVGGDMFEAIPAPDALLMKCILHDWDDEECVKLLKKCKEAIMKKGKKGKVIIIDIVVGNENGDKESLGTQLLFDMAMMVLVNGRERNEKEWAKLFFSSGFNNYKIIPIMMSSRSLIEVYP 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90924g00001 141 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 139 IPR029063 -
Stsc90924g00001 141 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 141 IPR016461 GO:0008168
Stsc90924g00001 141 PANTHER O-METHYLTRANSFERASE 16 125 IPR016461 GO:0008168
Stsc90924g00001 141 Pfam O-methyltransferase domain 15 122 IPR001077 GO:0008171
Stsc90924g00001 141 Gene3D Vaccinia Virus protein VP39 6 141 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90924g00001 Stsc-Chr90924 4513 6649 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90924g00001 18 141 Monolignol Biosynthesis Gene Families AT1G51990 40.476 1.40e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90924g00001 - K16040 qsa:O6P43_000776 161.77