Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc90917g00008 ATGGCCCGGAATGCGCCATCTCCGGAAAGAGAAGAAGTACGGCCTGGAATGCGCCATCTGTCTGTTGAGTTCGATGACAACATCGTTCTCCGGTTGCTCATTGTTTTCCGCCATGTGTTCCACCAGCAGTGCGTTGATCTCTGGCTCCATCGCCACAAGACATACCACGCTTGTCGCACCGATCTTGAAACAAGAAAGTCGTCTTCTTATGCTTCTCCTTCTAACATTCACGATCATAAAATGCAGAGTGTTGTTGTTGGAGGAAAATACGTAAACGCCAAAGATGTGTGCATTGACGTGAAAGAAGACGAGGATGATGATGGTAATAATAGATTCCTTCGGTCGCATTTGACAGGGCATTCAATAATTATGGTTAGTGAAGAAGGAAGAGACGACGACGATGATAGGTATAAGTTGAAGTTGCAAGAGAATGCAGAGTTGAGGATTGTTGACAATGAGATGAAGAAGAATAATCATCACCAATACTCCCACCACCTCTTGGTTTTGGAATATTTTTTTACTTCTCCAACCCCAGATGCAGCAGATAATGGCCATAAAAATTCTATACCACAACTCCTTTTCTAA 585 0.4342 MARNAPSPEREEVRPGMRHLSVEFDDNIVLRLLIVFRHVFHQQCVDLWLHRHKTYHACRTDLETRKSSSYASPSNIHDHKMQSVVVGGKYVNAKDVCIDVKEDEDDDGNNRFLRSHLTGHSIIMVSEEGRDDDDDRYKLKLQENAELRIVDNEMKKNNHHQYSHHLLVLEYFFTSPTPDAADNGHKNSIPQLLF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc90917g00008 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 26 177 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc90917g00008 Stsc-Chr90917 42786 44241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc90917g00008 23 169 Rapid Response to Elicitors AT3G05200 31.875 6.54e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc90917g00008 - - ahf:112747412 185.652